Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 AC009220.2-201ENST00000489759 1751 ntBASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 AC017002.4-201ENST00000604721 1525 ntBASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 OR52N3P-201ENST00000413417 934 ntBASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 RPL18AP14-201ENST00000417685 526 ntBASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 AK3P5-201ENST00000432033 519 ntBASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 BMS1P11-201ENST00000442351 885 ntBASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 AC009244.1-201ENST00000450566 258 ntBASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 TVP23BP2-201ENST00000455082 615 ntBASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 AL354872.1-201ENST00000456361 967 ntBASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 BMS1P9-201ENST00000457640 885 ntBASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 RN7SKP198-201ENST00000459286 306 ntBASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 OSTC-204ENST00000512478 663 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 AC016550.3-201ENST00000515706 767 ntBASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 AP004607.5-201ENST00000532034 217 ntBASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 OR7E19P-202ENST00000589942 844 ntBASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 AC073333.2-201ENST00000603589 769 ntBASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 AF129408.1-201ENST00000608767 431 ntBASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 AC005156.1-201ENST00000613371 573 ntBASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 AL645927.2-201ENST00000618350 349 ntBASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 AC114546.4-201ENST00000624413 369 ntBASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 AC006213.6-201ENST00000623722 4179 ntBASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
TRIM54Q9BYV2 AC126474.2-201ENST00000623268 1750 ntBASIC6.46□□□□□ -1.37
TRIM54Q9BYV2 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
TRIM54Q9BYV2 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
TRIM54Q9BYV2 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.46□□□□□ -1.37
TRIM54Q9BYV2 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.46□□□□□ -1.37
TRIM54Q9BYV2 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 RN7SKP191-201ENST00000364713 306 ntBASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 AC074375.1-201ENST00000372993 192 ntBASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 SNORA70H-201ENST00000383910 135 ntBASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 SNORA70J-201ENST00000384182 135 ntBASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 MIR138-2-201ENST00000384916 84 ntBASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 RNA5SP231-201ENST00000410496 138 ntBASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 AC092646.1-201ENST00000427142 901 ntBASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 PTP4A1P3-201ENST00000433661 420 ntBASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 MOB1AP2-201ENST00000446060 614 ntBASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 SLAMF6P1-201ENST00000451067 602 ntBASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 AC022080.2-201ENST00000452932 533 ntBASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 NPM1P17-201ENST00000479221 602 ntBASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM54Q9BYV2 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms