Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AL355355.1-201ENST00000442900 793 ntBASIC5.21□□□□□ -1.58
CX3CL1P78423 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.21□□□□□ -1.58
CX3CL1P78423 AC002075.1-201ENST00000457396 676 ntBASIC5.21□□□□□ -1.58
CX3CL1P78423 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.21□□□□□ -1.58
CX3CL1P78423 AC063955.1-201ENST00000462872 685 ntBASIC5.21□□□□□ -1.58
CX3CL1P78423 PCNAP1-201ENST00000505363 709 ntBASIC5.21□□□□□ -1.58
CX3CL1P78423 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CX3CL1P78423 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.21□□□□□ -1.58
CX3CL1P78423 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.21□□□□□ -1.58
CX3CL1P78423 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.21□□□□□ -1.58
CX3CL1P78423 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.21□□□□□ -1.58
CX3CL1P78423 OR5D2P-201ENST00000524390 911 ntBASIC5.21□□□□□ -1.58
CX3CL1P78423 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.21□□□□□ -1.58
CX3CL1P78423 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.21□□□□□ -1.58
CX3CL1P78423 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.21□□□□□ -1.58
CX3CL1P78423 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.21□□□□□ -1.58
CX3CL1P78423 AC027796.1-201ENST00000575593 512 ntBASIC5.21□□□□□ -1.58
CX3CL1P78423 TMF1P1-201ENST00000576058 373 ntBASIC5.21□□□□□ -1.58
CX3CL1P78423 RN7SL208P-201ENST00000577964 296 ntBASIC5.21□□□□□ -1.58
CX3CL1P78423 RPL29P33-201ENST00000587474 316 ntBASIC5.21□□□□□ -1.58
CX3CL1P78423 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.21□□□□□ -1.58
CX3CL1P78423 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.21□□□□□ -1.58
CX3CL1P78423 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.21□□□□□ -1.58
CX3CL1P78423 AC036176.3-201ENST00000602456 418 ntBASIC5.21□□□□□ -1.58
CX3CL1P78423 AC040174.2-201ENST00000602701 465 ntBASIC5.21□□□□□ -1.58
CX3CL1P78423 AC097467.4-201ENST00000605504 141 ntBASIC5.21□□□□□ -1.58
CX3CL1P78423 SNORD96A-201ENST00000606577 79 ntBASIC5.21□□□□□ -1.58
CX3CL1P78423 AL133445.2-201ENST00000611191 527 ntBASIC5.21□□□□□ -1.58
CX3CL1P78423 MIR6774-201ENST00000614651 70 ntBASIC5.21□□□□□ -1.58
CX3CL1P78423 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.21□□□□□ -1.58
CX3CL1P78423 AC005899.7-201ENST00000618199 588 ntBASIC5.21□□□□□ -1.58
CX3CL1P78423 AC074276.2-201ENST00000619891 348 ntBASIC5.21□□□□□ -1.58
CX3CL1P78423 AC063952.1-203ENST00000634410 658 ntBASIC5.21□□□□□ -1.58
CX3CL1P78423 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CX3CL1P78423 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CX3CL1P78423 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CX3CL1P78423 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CX3CL1P78423 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
CX3CL1P78423 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.21□□□□□ -1.58
CX3CL1P78423 SAMMSON-210ENST00000641260 1308 ntBASIC5.21□□□□□ -1.58
CX3CL1P78423 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CX3CL1P78423 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CX3CL1P78423 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.21□□□□□ -1.58
CX3CL1P78423 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CX3CL1P78423 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.2□□□□□ -1.58
CX3CL1P78423 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CX3CL1P78423 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CX3CL1P78423 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CX3CL1P78423 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CX3CL1P78423 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.2□□□□□ -1.58
CX3CL1P78423 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.2□□□□□ -1.58
CX3CL1P78423 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.2□□□□□ -1.58
CX3CL1P78423 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CX3CL1P78423 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CX3CL1P78423 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CX3CL1P78423 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CX3CL1P78423 RNA5SP188-201ENST00000362916 129 ntBASIC5.2□□□□□ -1.58
CX3CL1P78423 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.2□□□□□ -1.58
CX3CL1P78423 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CX3CL1P78423 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CX3CL1P78423 NACAP7-201ENST00000407371 609 ntBASIC5.2□□□□□ -1.58
CX3CL1P78423 AC017078.1-201ENST00000416146 368 ntBASIC5.2□□□□□ -1.58
CX3CL1P78423 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.2□□□□□ -1.58
CX3CL1P78423 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.2□□□□□ -1.58
CX3CL1P78423 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.2□□□□□ -1.58
CX3CL1P78423 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.2□□□□□ -1.58
CX3CL1P78423 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.2□□□□□ -1.58
CX3CL1P78423 MTND4LP7-201ENST00000431728 294 ntBASIC5.2□□□□□ -1.58
CX3CL1P78423 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.2□□□□□ -1.58
CX3CL1P78423 AL590762.3-201ENST00000436372 640 ntBASIC5.2□□□□□ -1.58
CX3CL1P78423 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.2□□□□□ -1.58
CX3CL1P78423 ARL5AP3-201ENST00000439327 386 ntBASIC5.2□□□□□ -1.58
CX3CL1P78423 AC234771.4-201ENST00000441416 730 ntBASIC5.2□□□□□ -1.58
CX3CL1P78423 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.2□□□□□ -1.58
CX3CL1P78423 RAB28P3-201ENST00000448325 597 ntBASIC5.2□□□□□ -1.58
CX3CL1P78423 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CX3CL1P78423 MGAT2P1-201ENST00000449718 797 ntBASIC5.2□□□□□ -1.58
CX3CL1P78423 MTND5P8-201ENST00000449817 1083 ntBASIC5.2□□□□□ -1.58
CX3CL1P78423 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.2□□□□□ -1.58
CX3CL1P78423 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.2□□□□□ -1.58
CX3CL1P78423 RN7SL165P-201ENST00000477476 291 ntBASIC5.2□□□□□ -1.58
CX3CL1P78423 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.2□□□□□ -1.58
CX3CL1P78423 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.2□□□□□ -1.58
CX3CL1P78423 RFPL4AP3-201ENST00000515267 345 ntBASIC5.2□□□□□ -1.58
CX3CL1P78423 RNU6-491P-201ENST00000516099 110 ntBASIC5.2□□□□□ -1.58
CX3CL1P78423 SCARNA5-201ENST00000516201 276 ntBASIC5.2□□□□□ -1.58
CX3CL1P78423 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.2□□□□□ -1.58
CX3CL1P78423 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.2□□□□□ -1.58
CX3CL1P78423 AC008147.3-201ENST00000548666 354 ntBASIC5.2□□□□□ -1.58
CX3CL1P78423 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.2□□□□□ -1.58
CX3CL1P78423 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.2□□□□□ -1.58
CX3CL1P78423 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CX3CL1P78423 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.2□□□□□ -1.58
CX3CL1P78423 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.2□□□□□ -1.58
CX3CL1P78423 AC114477.1-201ENST00000605097 605 ntBASIC5.2□□□□□ -1.58
CX3CL1P78423 HMGB1P51-201ENST00000605166 638 ntBASIC5.2□□□□□ -1.58
CX3CL1P78423 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CX3CL1P78423 AL137246.2-201ENST00000613439 662 ntBASIC5.2□□□□□ -1.58
CX3CL1P78423 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.2□□□□□ -1.58
CX3CL1P78423 AL356490.1-201ENST00000623079 479 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms