Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RNU6-697P-201ENST00000363348 107 ntBASIC6.06□□□□□ -1.44
RAE1P78406 RNA5SP85-201ENST00000365378 119 ntBASIC6.06□□□□□ -1.44
RAE1P78406 SNORA70H-201ENST00000383910 135 ntBASIC6.06□□□□□ -1.44
RAE1P78406 SNORA70J-201ENST00000384182 135 ntBASIC6.06□□□□□ -1.44
RAE1P78406 AL356057.1-202ENST00000402263 756 ntBASIC6.06□□□□□ -1.44
RAE1P78406 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RAE1P78406 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.06□□□□□ -1.44
RAE1P78406 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.06□□□□□ -1.44
RAE1P78406 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.06□□□□□ -1.44
RAE1P78406 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC6.06□□□□□ -1.44
RAE1P78406 NPM1P26-201ENST00000426339 738 ntBASIC6.06□□□□□ -1.44
RAE1P78406 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.06□□□□□ -1.44
RAE1P78406 AL022237.1-201ENST00000446663 358 ntBASIC6.06□□□□□ -1.44
RAE1P78406 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.06□□□□□ -1.44
RAE1P78406 NPM1P9-201ENST00000453156 844 ntBASIC6.06□□□□□ -1.44
RAE1P78406 RPS27AP3-201ENST00000453803 454 ntBASIC6.06□□□□□ -1.44
RAE1P78406 AC103563.5-201ENST00000455643 364 ntBASIC6.06□□□□□ -1.44
RAE1P78406 EIF2S2P5-201ENST00000457635 968 ntBASIC6.06□□□□□ -1.44
RAE1P78406 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC6.06□□□□□ -1.44
RAE1P78406 RN7SL221P-201ENST00000466190 281 ntBASIC6.06□□□□□ -1.44
RAE1P78406 AC078857.1-201ENST00000469870 667 ntBASIC6.06□□□□□ -1.44
RAE1P78406 AC022730.1-201ENST00000473114 568 ntBASIC6.06□□□□□ -1.44
RAE1P78406 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.06□□□□□ -1.44
RAE1P78406 OR9A1P-202ENST00000484361 945 ntBASIC6.06□□□□□ -1.44
RAE1P78406 AC090543.1-201ENST00000492168 485 ntBASIC6.06□□□□□ -1.44
RAE1P78406 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.06□□□□□ -1.44
RAE1P78406 AC093325.1-201ENST00000508378 326 ntBASIC6.06□□□□□ -1.44
RAE1P78406 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.06□□□□□ -1.44
RAE1P78406 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.06□□□□□ -1.44
RAE1P78406 TPT1P8-201ENST00000510120 555 ntBASIC6.06□□□□□ -1.44
RAE1P78406 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.06□□□□□ -1.44
RAE1P78406 AC084851.2-201ENST00000530377 364 ntBASIC6.06□□□□□ -1.44
RAE1P78406 OR4A40P-201ENST00000533878 948 ntBASIC6.06□□□□□ -1.44
RAE1P78406 AC068339.2-201ENST00000534395 618 ntBASIC6.06□□□□□ -1.44
RAE1P78406 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.06□□□□□ -1.44
RAE1P78406 AC090115.2-201ENST00000548060 883 ntBASIC6.06□□□□□ -1.44
RAE1P78406 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RAE1P78406 RPL3P13-201ENST00000550415 216 ntBASIC6.06□□□□□ -1.44
RAE1P78406 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RAE1P78406 AC009120.3-201ENST00000563335 499 ntBASIC6.06□□□□□ -1.44
RAE1P78406 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RAE1P78406 AC027216.1-201ENST00000577726 685 ntBASIC6.06□□□□□ -1.44
RAE1P78406 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.06□□□□□ -1.44
RAE1P78406 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.06□□□□□ -1.44
RAE1P78406 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC6.06□□□□□ -1.44
RAE1P78406 AC107993.1-201ENST00000591343 684 ntBASIC6.06□□□□□ -1.44
RAE1P78406 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.06□□□□□ -1.44
RAE1P78406 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
RAE1P78406 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.06□□□□□ -1.44
RAE1P78406 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.06□□□□□ -1.44
RAE1P78406 AL356752.1-201ENST00000615844 593 ntBASIC6.06□□□□□ -1.44
RAE1P78406 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.06□□□□□ -1.44
RAE1P78406 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.06□□□□□ -1.44
RAE1P78406 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RAE1P78406 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.06□□□□□ -1.44
RAE1P78406 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
RAE1P78406 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RAE1P78406 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RAE1P78406 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
RAE1P78406 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RAE1P78406 AC009779.8-201ENST00000641684 4384 ntBASIC6.06□□□□□ -1.44
RAE1P78406 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RAE1P78406 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
RAE1P78406 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RAE1P78406 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
RAE1P78406 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.06□□□□□ -1.44
RAE1P78406 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
RAE1P78406 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.05□□□□□ -1.44
RAE1P78406 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.05□□□□□ -1.44
RAE1P78406 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
RAE1P78406 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RAE1P78406 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.05□□□□□ -1.44
RAE1P78406 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RAE1P78406 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RAE1P78406 SNORD16-201ENST00000362803 99 ntBASIC6.05□□□□□ -1.44
RAE1P78406 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.05□□□□□ -1.44
RAE1P78406 RNU6-40P-201ENST00000384254 107 ntBASIC6.05□□□□□ -1.44
RAE1P78406 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.05□□□□□ -1.44
RAE1P78406 AL033519.1-201ENST00000407266 307 ntBASIC6.05□□□□□ -1.44
RAE1P78406 MIR1266-201ENST00000408125 84 ntBASIC6.05□□□□□ -1.44
RAE1P78406 UBTFL2-201ENST00000411859 1191 ntBASIC6.05□□□□□ -1.44
RAE1P78406 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC6.05□□□□□ -1.44
RAE1P78406 AL645638.1-201ENST00000440519 361 ntBASIC6.05□□□□□ -1.44
RAE1P78406 GTF2IP14-201ENST00000441415 586 ntBASIC6.05□□□□□ -1.44
RAE1P78406 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.05□□□□□ -1.44
RAE1P78406 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
RAE1P78406 RN7SL413P-201ENST00000482700 297 ntBASIC6.05□□□□□ -1.44
RAE1P78406 RN7SL267P-201ENST00000485107 261 ntBASIC6.05□□□□□ -1.44
RAE1P78406 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.05□□□□□ -1.44
RAE1P78406 SSR3-208ENST00000496050 579 ntTSL 4 BASIC6.05□□□□□ -1.44
RAE1P78406 PCNAP1-201ENST00000505363 709 ntBASIC6.05□□□□□ -1.44
RAE1P78406 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.05□□□□□ -1.44
RAE1P78406 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC6.05□□□□□ -1.44
RAE1P78406 SUMO2P19-201ENST00000518920 295 ntBASIC6.05□□□□□ -1.44
RAE1P78406 VTA1P2-201ENST00000520205 911 ntBASIC6.05□□□□□ -1.44
RAE1P78406 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.05□□□□□ -1.44
RAE1P78406 AC027796.1-201ENST00000575593 512 ntBASIC6.05□□□□□ -1.44
RAE1P78406 SYPL1P2-201ENST00000582878 727 ntBASIC6.05□□□□□ -1.44
RAE1P78406 OR1AB1P-201ENST00000585564 761 ntBASIC6.05□□□□□ -1.44
RAE1P78406 AC133794.1-201ENST00000602731 914 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms