Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AC245036.1-201ENST00000391727 309 ntBASIC5.45□□□□□ -1.54
VBP1P61758 RN7SKP281-201ENST00000410472 352 ntBASIC5.45□□□□□ -1.54
VBP1P61758 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VBP1P61758 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC5.45□□□□□ -1.54
VBP1P61758 PRUNEP1-201ENST00000425846 705 ntBASIC5.45□□□□□ -1.54
VBP1P61758 MED28P4-201ENST00000433137 572 ntBASIC5.45□□□□□ -1.54
VBP1P61758 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.45□□□□□ -1.54
VBP1P61758 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.45□□□□□ -1.54
VBP1P61758 HSPA8P3-201ENST00000449300 780 ntBASIC5.45□□□□□ -1.54
VBP1P61758 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC5.45□□□□□ -1.54
VBP1P61758 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.45□□□□□ -1.54
VBP1P61758 SNORA35.1-201ENST00000458908 128 ntBASIC5.45□□□□□ -1.54
VBP1P61758 RN7SL492P-201ENST00000460700 295 ntBASIC5.45□□□□□ -1.54
VBP1P61758 RPS4XP12-201ENST00000461747 709 ntBASIC5.45□□□□□ -1.54
VBP1P61758 RPL7P17-201ENST00000470927 724 ntBASIC5.45□□□□□ -1.54
VBP1P61758 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VBP1P61758 GGTA1P-204ENST00000488429 1104 ntBASIC5.45□□□□□ -1.54
VBP1P61758 C4orf22-205ENST00000508675 753 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VBP1P61758 AC010343.2-201ENST00000510162 224 ntBASIC5.45□□□□□ -1.54
VBP1P61758 AC090958.1-201ENST00000511122 351 ntBASIC5.45□□□□□ -1.54
VBP1P61758 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC5.45□□□□□ -1.54
VBP1P61758 RNA5SP318-201ENST00000516352 92 ntBASIC5.45□□□□□ -1.54
VBP1P61758 AC064807.3-201ENST00000523810 470 ntTSL 2 BASIC5.45□□□□□ -1.54
VBP1P61758 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VBP1P61758 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.45□□□□□ -1.54
VBP1P61758 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.45□□□□□ -1.54
VBP1P61758 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.45□□□□□ -1.54
VBP1P61758 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.45□□□□□ -1.54
VBP1P61758 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.45□□□□□ -1.54
VBP1P61758 ZNF322P1-201ENST00000568013 1209 ntBASIC5.45□□□□□ -1.54
VBP1P61758 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.45□□□□□ -1.54
VBP1P61758 AC027216.1-201ENST00000577726 685 ntBASIC5.45□□□□□ -1.54
VBP1P61758 RNU4ATAC-201ENST00000580972 127 ntBASIC5.45□□□□□ -1.54
VBP1P61758 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.45□□□□□ -1.54
VBP1P61758 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.45□□□□□ -1.54
VBP1P61758 AL132821.1-201ENST00000616029 394 ntBASIC5.45□□□□□ -1.54
VBP1P61758 MIR6085-201ENST00000618314 110 ntBASIC5.45□□□□□ -1.54
VBP1P61758 MIR7159-201ENST00000620587 66 ntBASIC5.45□□□□□ -1.54
VBP1P61758 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.45□□□□□ -1.54
VBP1P61758 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.45□□□□□ -1.54
VBP1P61758 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VBP1P61758 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.45□□□□□ -1.54
VBP1P61758 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
VBP1P61758 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC5.45□□□□□ -1.54
VBP1P61758 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
VBP1P61758 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VBP1P61758 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.45□□□□□ -1.54
VBP1P61758 FCGR3B-204ENST00000531221 1339 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VBP1P61758 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VBP1P61758 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
VBP1P61758 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
VBP1P61758 AC083843.2-201ENST00000568248 6253 ntBASIC5.45□□□□□ -1.54
VBP1P61758 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VBP1P61758 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VBP1P61758 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VBP1P61758 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
VBP1P61758 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VBP1P61758 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VBP1P61758 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VBP1P61758 AC011503.2-201ENST00000594230 1500 ntBASIC5.44□□□□□ -1.54
VBP1P61758 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.44□□□□□ -1.54
VBP1P61758 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
VBP1P61758 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VBP1P61758 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VBP1P61758 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VBP1P61758 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VBP1P61758 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VBP1P61758 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VBP1P61758 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VBP1P61758 RN7SKP69-201ENST00000365390 305 ntBASIC5.44□□□□□ -1.54
VBP1P61758 OR2AK2-201ENST00000366480 1154 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
VBP1P61758 FARP1-202ENST00000376581 1021 ntTSL 2 BASIC5.44□□□□□ -1.54
VBP1P61758 SNORA35-201ENST00000386104 128 ntBASIC5.44□□□□□ -1.54
VBP1P61758 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.44□□□□□ -1.54
VBP1P61758 AL590635.1-201ENST00000406314 586 ntBASIC5.44□□□□□ -1.54
VBP1P61758 RN7SKP268-201ENST00000411107 316 ntBASIC5.44□□□□□ -1.54
VBP1P61758 RNU2-18P-201ENST00000411224 162 ntBASIC5.44□□□□□ -1.54
VBP1P61758 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.44□□□□□ -1.54
VBP1P61758 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.44□□□□□ -1.54
VBP1P61758 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.44□□□□□ -1.54
VBP1P61758 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VBP1P61758 SETP10-201ENST00000424368 814 ntBASIC5.44□□□□□ -1.54
VBP1P61758 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.44□□□□□ -1.54
VBP1P61758 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
VBP1P61758 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VBP1P61758 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.44□□□□□ -1.54
VBP1P61758 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.44□□□□□ -1.54
VBP1P61758 RSU1P1-201ENST00000453416 441 ntBASIC5.44□□□□□ -1.54
VBP1P61758 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
VBP1P61758 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
VBP1P61758 RN7SL188P-201ENST00000469842 285 ntBASIC5.44□□□□□ -1.54
VBP1P61758 EFCAB10-204ENST00000485614 799 ntTSL 5 BASIC5.44□□□□□ -1.54
VBP1P61758 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.44□□□□□ -1.54
VBP1P61758 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VBP1P61758 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
VBP1P61758 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.44□□□□□ -1.54
VBP1P61758 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.44□□□□□ -1.54
VBP1P61758 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC5.44□□□□□ -1.54
VBP1P61758 RNU6-964P-201ENST00000516524 69 ntBASIC5.44□□□□□ -1.54
VBP1P61758 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms