Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 U1.34-201ENST00000618578 162 ntBASIC5.79□□□□□ -1.48
CDH11P55287 U1.31-201ENST00000620022 160 ntBASIC5.79□□□□□ -1.48
CDH11P55287 AC089999.3-201ENST00000622440 577 ntBASIC5.79□□□□□ -1.48
CDH11P55287 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH11P55287 AC022726.2-201ENST00000634673 547 ntBASIC5.79□□□□□ -1.48
CDH11P55287 AL596275.2-207ENST00000641188 675 ntBASIC5.79□□□□□ -1.48
CDH11P55287 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH11P55287 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH11P55287 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CDH11P55287 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CDH11P55287 SMG1P5-202ENST00000529428 4219 ntBASIC5.79□□□□□ -1.48
CDH11P55287 SMG1P2-201ENST00000566127 4221 ntBASIC5.79□□□□□ -1.48
CDH11P55287 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CDH11P55287 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CDH11P55287 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH11P55287 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH11P55287 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH11P55287 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH11P55287 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH11P55287 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH11P55287 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.79□□□□□ -1.48
CDH11P55287 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.79□□□□□ -1.48
CDH11P55287 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CDH11P55287 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CDH11P55287 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH11P55287 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH11P55287 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH11P55287 PSMC1P6-201ENST00000477233 1319 ntBASIC5.78□□□□□ -1.48
CDH11P55287 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.78□□□□□ -1.48
CDH11P55287 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CDH11P55287 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH11P55287 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH11P55287 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CDH11P55287 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH11P55287 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CDH11P55287 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.78□□□□□ -1.48
CDH11P55287 MRPS21P5-201ENST00000417885 231 ntBASIC5.78□□□□□ -1.48
CDH11P55287 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH11P55287 RPL24P2-201ENST00000421023 475 ntBASIC5.78□□□□□ -1.48
CDH11P55287 GPN3P1-201ENST00000423883 535 ntBASIC5.78□□□□□ -1.48
CDH11P55287 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH11P55287 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH11P55287 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.78□□□□□ -1.48
CDH11P55287 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.78□□□□□ -1.48
CDH11P55287 AK3P5-201ENST00000432033 519 ntBASIC5.78□□□□□ -1.48
CDH11P55287 AL590399.4-201ENST00000436561 601 ntBASIC5.78□□□□□ -1.48
CDH11P55287 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH11P55287 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH11P55287 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH11P55287 AL022319.1-201ENST00000458183 1167 ntBASIC5.78□□□□□ -1.48
CDH11P55287 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.78□□□□□ -1.48
CDH11P55287 RN7SL221P-201ENST00000466190 281 ntBASIC5.78□□□□□ -1.48
CDH11P55287 OR9A1P-202ENST00000484361 945 ntBASIC5.78□□□□□ -1.48
CDH11P55287 PPP1R11P1-201ENST00000486095 376 ntBASIC5.78□□□□□ -1.48
CDH11P55287 RN7SL568P-201ENST00000493069 298 ntBASIC5.78□□□□□ -1.48
CDH11P55287 AP001960.1-201ENST00000506494 658 ntBASIC5.78□□□□□ -1.48
CDH11P55287 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.78□□□□□ -1.48
CDH11P55287 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH11P55287 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.78□□□□□ -1.48
CDH11P55287 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH11P55287 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
CDH11P55287 RN7SL208P-201ENST00000577964 296 ntBASIC5.78□□□□□ -1.48
CDH11P55287 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.78□□□□□ -1.48
CDH11P55287 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH11P55287 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.78□□□□□ -1.48
CDH11P55287 AC005828.7-201ENST00000607331 556 ntBASIC5.78□□□□□ -1.48
CDH11P55287 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.78□□□□□ -1.48
CDH11P55287 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH11P55287 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH11P55287 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CDH11P55287 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
CDH11P55287 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH11P55287 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH11P55287 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH11P55287 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH11P55287 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH11P55287 AC005725.1-201ENST00000577346 2607 ntBASIC5.78□□□□□ -1.48
CDH11P55287 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.48
CDH11P55287 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
CDH11P55287 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CDH11P55287 PSMC1P4-201ENST00000515236 1327 ntBASIC5.77□□□□□ -1.49
CDH11P55287 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH11P55287 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CDH11P55287 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CDH11P55287 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.77□□□□□ -1.49
CDH11P55287 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH11P55287 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH11P55287 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH11P55287 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDH11P55287 NPM1P10-201ENST00000398310 865 ntBASIC5.77□□□□□ -1.49
CDH11P55287 RPL5P20-201ENST00000403848 896 ntBASIC5.77□□□□□ -1.49
CDH11P55287 RPL12P23-201ENST00000405880 490 ntBASIC5.77□□□□□ -1.49
CDH11P55287 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.77□□□□□ -1.49
CDH11P55287 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.77□□□□□ -1.49
CDH11P55287 RANP6-201ENST00000413691 644 ntBASIC5.77□□□□□ -1.49
CDH11P55287 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.77□□□□□ -1.49
CDH11P55287 RPL34P27-201ENST00000428810 349 ntBASIC5.77□□□□□ -1.49
CDH11P55287 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.77□□□□□ -1.49
CDH11P55287 OR6R1P-201ENST00000431838 940 ntBASIC5.77□□□□□ -1.49
CDH11P55287 GAPDHP34-201ENST00000432112 823 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms