Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.82□□□□□ -1.32
VCPP55072 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.82□□□□□ -1.32
VCPP55072 SNX18P3-202ENST00000565670 1750 ntBASIC6.82□□□□□ -1.32
VCPP55072 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VCPP55072 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
VCPP55072 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VCPP55072 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.82□□□□□ -1.32
VCPP55072 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
VCPP55072 AC023245.2-201ENST00000530760 2978 ntBASIC6.81□□□□□ -1.32
VCPP55072 AC009779.8-201ENST00000641684 4384 ntBASIC6.81□□□□□ -1.32
VCPP55072 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.81□□□□□ -1.32
VCPP55072 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.81□□□□□ -1.32
VCPP55072 AKAP17BP-201ENST00000431706 2719 ntBASIC6.81□□□□□ -1.32
VCPP55072 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.81□□□□□ -1.32
VCPP55072 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VCPP55072 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.81□□□□□ -1.32
VCPP55072 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
VCPP55072 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.81□□□□□ -1.32
VCPP55072 AL050335.1-201ENST00000396909 869 ntBASIC6.81□□□□□ -1.32
VCPP55072 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.81□□□□□ -1.32
VCPP55072 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.81□□□□□ -1.32
VCPP55072 AL929472.1-201ENST00000417484 429 ntBASIC6.81□□□□□ -1.32
VCPP55072 MTND2P12-201ENST00000417560 1252 ntBASIC6.81□□□□□ -1.32
VCPP55072 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.81□□□□□ -1.32
VCPP55072 OSTCP4-201ENST00000424397 449 ntBASIC6.81□□□□□ -1.32
VCPP55072 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.81□□□□□ -1.32
VCPP55072 TUBB4BP6-201ENST00000437576 479 ntBASIC6.81□□□□□ -1.32
VCPP55072 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VCPP55072 MGAT2P1-201ENST00000449718 797 ntBASIC6.81□□□□□ -1.32
VCPP55072 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.81□□□□□ -1.32
VCPP55072 AC022415.1-202ENST00000486612 523 ntBASIC6.81□□□□□ -1.32
VCPP55072 AP002453.1-201ENST00000492327 668 ntBASIC6.81□□□□□ -1.32
VCPP55072 NPM1P27-201ENST00000502784 830 ntBASIC6.81□□□□□ -1.32
VCPP55072 AC025458.1-201ENST00000506046 166 ntBASIC6.81□□□□□ -1.32
VCPP55072 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.81□□□□□ -1.32
VCPP55072 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.81□□□□□ -1.32
VCPP55072 AP006245.2-201ENST00000522004 300 ntBASIC6.81□□□□□ -1.32
VCPP55072 AC084337.1-201ENST00000524809 686 ntBASIC6.81□□□□□ -1.32
VCPP55072 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.81□□□□□ -1.32
VCPP55072 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.81□□□□□ -1.32
VCPP55072 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.81□□□□□ -1.32
VCPP55072 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
VCPP55072 AP003115.1-201ENST00000569849 463 ntBASIC6.81□□□□□ -1.32
VCPP55072 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.81□□□□□ -1.32
VCPP55072 AC008507.3-201ENST00000585753 472 ntBASIC6.81□□□□□ -1.32
VCPP55072 AL049840.5-201ENST00000602827 552 ntBASIC6.81□□□□□ -1.32
VCPP55072 FAM72A-208ENST00000607379 1139 ntBASIC6.81□□□□□ -1.32
VCPP55072 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.81□□□□□ -1.32
VCPP55072 TCL6_3.1-201ENST00000619064 137 ntBASIC6.81□□□□□ -1.32
VCPP55072 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.81□□□□□ -1.32
VCPP55072 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.81□□□□□ -1.32
VCPP55072 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
VCPP55072 MTND5P12-201ENST00000502851 1449 ntBASIC6.81□□□□□ -1.32
VCPP55072 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.81□□□□□ -1.32
VCPP55072 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.81□□□□□ -1.32
VCPP55072 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
VCPP55072 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.81□□□□□ -1.32
VCPP55072 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VCPP55072 AC105749.1-201ENST00000631338 2008 ntBASIC6.81□□□□□ -1.32
VCPP55072 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
VCPP55072 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VCPP55072 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.8□□□□□ -1.32
VCPP55072 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
VCPP55072 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
VCPP55072 AL117378.2-201ENST00000622916 1337 ntBASIC6.8□□□□□ -1.32
VCPP55072 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VCPP55072 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VCPP55072 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
VCPP55072 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
VCPP55072 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.8□□□□□ -1.32
VCPP55072 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.8□□□□□ -1.32
VCPP55072 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VCPP55072 RNA5SP284-201ENST00000384547 118 ntBASIC6.8□□□□□ -1.32
VCPP55072 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VCPP55072 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.8□□□□□ -1.32
VCPP55072 AL161636.2-201ENST00000445179 927 ntBASIC6.8□□□□□ -1.32
VCPP55072 AC010240.2-201ENST00000445363 1205 ntBASIC6.8□□□□□ -1.32
VCPP55072 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.8□□□□□ -1.32
VCPP55072 RPL12P31-201ENST00000478433 450 ntBASIC6.8□□□□□ -1.32
VCPP55072 RN7SL273P-201ENST00000481561 299 ntBASIC6.8□□□□□ -1.32
VCPP55072 AC008410.1-201ENST00000483777 339 ntBASIC6.8□□□□□ -1.32
VCPP55072 GM2AP2-201ENST00000491764 562 ntBASIC6.8□□□□□ -1.32
VCPP55072 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.8□□□□□ -1.32
VCPP55072 AC018645.1-201ENST00000505003 109 ntBASIC6.8□□□□□ -1.32
VCPP55072 IGKV2-19-201ENST00000518132 283 ntBASIC6.8□□□□□ -1.32
VCPP55072 AC060775.1-201ENST00000518241 520 ntBASIC6.8□□□□□ -1.32
VCPP55072 IGKV3D-25-201ENST00000519599 235 ntBASIC6.8□□□□□ -1.32
VCPP55072 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VCPP55072 CYCSP25-201ENST00000525280 316 ntBASIC6.8□□□□□ -1.32
VCPP55072 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
VCPP55072 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.8□□□□□ -1.32
VCPP55072 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.8□□□□□ -1.32
VCPP55072 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.8□□□□□ -1.32
VCPP55072 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VCPP55072 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.8□□□□□ -1.32
VCPP55072 OR7E18P-201ENST00000592589 702 ntBASIC6.8□□□□□ -1.32
VCPP55072 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VCPP55072 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.8□□□□□ -1.32
VCPP55072 AC126175.1-201ENST00000617041 758 ntBASIC6.8□□□□□ -1.32
VCPP55072 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms