Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CLCN3P51790 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CLCN3P51790 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CLCN3P51790 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CLCN3P51790 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
CLCN3P51790 OR7E25P-201ENST00000344844 931 ntBASIC6.79□□□□□ -1.32
CLCN3P51790 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.79□□□□□ -1.32
CLCN3P51790 RNU11-6P-201ENST00000391127 133 ntBASIC6.79□□□□□ -1.32
CLCN3P51790 HMGN1P20-201ENST00000411849 300 ntBASIC6.79□□□□□ -1.32
CLCN3P51790 AC245096.1-201ENST00000413104 546 ntBASIC6.79□□□□□ -1.32
CLCN3P51790 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.79□□□□□ -1.32
CLCN3P51790 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.79□□□□□ -1.32
CLCN3P51790 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.79□□□□□ -1.32
CLCN3P51790 VN1R96P-201ENST00000446052 858 ntBASIC6.79□□□□□ -1.32
CLCN3P51790 RPL5P16-201ENST00000471467 790 ntBASIC6.79□□□□□ -1.32
CLCN3P51790 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CLCN3P51790 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.79□□□□□ -1.32
CLCN3P51790 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC6.79□□□□□ -1.32
CLCN3P51790 RNA5SP400-201ENST00000517155 111 ntBASIC6.79□□□□□ -1.32
CLCN3P51790 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.79□□□□□ -1.32
CLCN3P51790 AC060775.1-201ENST00000518241 520 ntBASIC6.79□□□□□ -1.32
CLCN3P51790 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC6.79□□□□□ -1.32
CLCN3P51790 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC6.79□□□□□ -1.32
CLCN3P51790 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.79□□□□□ -1.32
CLCN3P51790 MTATP6P25-201ENST00000574491 261 ntBASIC6.79□□□□□ -1.32
CLCN3P51790 AP005119.1-201ENST00000580956 292 ntBASIC6.79□□□□□ -1.32
CLCN3P51790 RNU4ATAC-201ENST00000580972 127 ntBASIC6.79□□□□□ -1.32
CLCN3P51790 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.79□□□□□ -1.32
CLCN3P51790 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.79□□□□□ -1.32
CLCN3P51790 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.79□□□□□ -1.32
CLCN3P51790 AC108673.3-201ENST00000609183 335 ntBASIC6.79□□□□□ -1.32
CLCN3P51790 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC6.79□□□□□ -1.32
CLCN3P51790 AL137067.2-201ENST00000621202 131 ntBASIC6.79□□□□□ -1.32
CLCN3P51790 AC002044.3-201ENST00000623314 541 ntBASIC6.79□□□□□ -1.32
CLCN3P51790 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.79□□□□□ -1.32
CLCN3P51790 AC129915.3-201ENST00000634128 948 ntBASIC6.79□□□□□ -1.32
CLCN3P51790 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.79□□□□□ -1.32
CLCN3P51790 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.79□□□□□ -1.32
CLCN3P51790 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CLCN3P51790 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.79□□□□□ -1.32
CLCN3P51790 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CLCN3P51790 AC007406.5-201ENST00000570140 3170 ntBASIC6.79□□□□□ -1.32
CLCN3P51790 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
CLCN3P51790 CDY5P-201ENST00000411487 1580 ntBASIC6.78□□□□□ -1.32
CLCN3P51790 CDY9P-201ENST00000451397 1580 ntBASIC6.78□□□□□ -1.32
CLCN3P51790 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
CLCN3P51790 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CLCN3P51790 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CLCN3P51790 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
CLCN3P51790 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CLCN3P51790 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CLCN3P51790 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.78□□□□□ -1.32
CLCN3P51790 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CLCN3P51790 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CLCN3P51790 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CLCN3P51790 TMSB4XP2-201ENST00000335179 210 ntBASIC6.78□□□□□ -1.32
CLCN3P51790 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CLCN3P51790 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.78□□□□□ -1.32
CLCN3P51790 AL096711.1-201ENST00000404780 554 ntBASIC6.78□□□□□ -1.32
CLCN3P51790 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.78□□□□□ -1.32
CLCN3P51790 CDY8P-201ENST00000428380 1279 ntBASIC6.78□□□□□ -1.32
CLCN3P51790 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.78□□□□□ -1.32
CLCN3P51790 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CLCN3P51790 CDY20P-201ENST00000447528 1279 ntBASIC6.78□□□□□ -1.32
CLCN3P51790 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.78□□□□□ -1.32
CLCN3P51790 AC073594.1-201ENST00000462065 364 ntBASIC6.78□□□□□ -1.32
CLCN3P51790 AC084754.1-201ENST00000463466 464 ntBASIC6.78□□□□□ -1.32
CLCN3P51790 Y_RNA.667-201ENST00000516212 107 ntBASIC6.78□□□□□ -1.32
CLCN3P51790 AC022784.5-201ENST00000522241 437 ntBASIC6.78□□□□□ -1.32
CLCN3P51790 RPA2P3-201ENST00000533268 770 ntBASIC6.78□□□□□ -1.32
CLCN3P51790 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.78□□□□□ -1.32
CLCN3P51790 RPA2P1-201ENST00000556557 721 ntBASIC6.78□□□□□ -1.32
CLCN3P51790 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.78□□□□□ -1.32
CLCN3P51790 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.78□□□□□ -1.32
CLCN3P51790 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.78□□□□□ -1.32
CLCN3P51790 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.78□□□□□ -1.32
CLCN3P51790 AC245014.3-201ENST00000618589 347 ntBASIC6.78□□□□□ -1.32
CLCN3P51790 AC096708.4-201ENST00000620563 552 ntBASIC6.78□□□□□ -1.32
CLCN3P51790 AC022726.2-201ENST00000634673 547 ntBASIC6.78□□□□□ -1.32
CLCN3P51790 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.78□□□□□ -1.32
CLCN3P51790 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.78□□□□□ -1.32
CLCN3P51790 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.78□□□□□ -1.32
CLCN3P51790 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.78□□□□□ -1.32
CLCN3P51790 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
CLCN3P51790 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CLCN3P51790 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CLCN3P51790 AP000866.6-201ENST00000638898 3579 ntBASIC6.78□□□□□ -1.32
CLCN3P51790 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
CLCN3P51790 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.77□□□□□ -1.33
CLCN3P51790 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CLCN3P51790 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.77□□□□□ -1.33
CLCN3P51790 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
CLCN3P51790 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.77□□□□□ -1.33
CLCN3P51790 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.77□□□□□ -1.33
CLCN3P51790 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.77□□□□□ -1.33
CLCN3P51790 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CLCN3P51790 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.77□□□□□ -1.33
CLCN3P51790 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.77□□□□□ -1.33
CLCN3P51790 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CLCN3P51790 RNA5SP375-201ENST00000362975 119 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms