Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 TRIM51HP-202ENST00000530412 1823 ntBASIC8.25□□□□□ -1.09
RFX1P22670 AL391994.1-201ENST00000254724 282 ntBASIC8.25□□□□□ -1.09
RFX1P22670 OR56B2P-201ENST00000317102 954 ntBASIC8.25□□□□□ -1.09
RFX1P22670 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RFX1P22670 OR5H15-201ENST00000383696 930 ntBASIC8.25□□□□□ -1.09
RFX1P22670 RN7SKP273-201ENST00000411392 314 ntBASIC8.25□□□□□ -1.09
RFX1P22670 RAD23BP2-201ENST00000416003 1207 ntBASIC8.25□□□□□ -1.09
RFX1P22670 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC8.25□□□□□ -1.09
RFX1P22670 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC8.25□□□□□ -1.09
RFX1P22670 GAPDHP34-201ENST00000432112 823 ntBASIC8.25□□□□□ -1.09
RFX1P22670 RPL35P8-201ENST00000433284 337 ntBASIC8.25□□□□□ -1.09
RFX1P22670 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC8.25□□□□□ -1.09
RFX1P22670 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC8.25□□□□□ -1.09
RFX1P22670 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC8.25□□□□□ -1.09
RFX1P22670 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC8.25□□□□□ -1.09
RFX1P22670 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC8.25□□□□□ -1.09
RFX1P22670 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
RFX1P22670 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC8.25□□□□□ -1.09
RFX1P22670 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC8.25□□□□□ -1.09
RFX1P22670 RN7SL870P-201ENST00000460111 296 ntBASIC8.25□□□□□ -1.09
RFX1P22670 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RFX1P22670 XACT-201ENST00000468762 497 ntTSL 5 BASIC8.25□□□□□ -1.09
RFX1P22670 GAPDHP36-201ENST00000480688 918 ntBASIC8.25□□□□□ -1.09
RFX1P22670 AC079768.1-201ENST00000503181 711 ntBASIC8.25□□□□□ -1.09
RFX1P22670 AC010424.1-201ENST00000506336 297 ntBASIC8.25□□□□□ -1.09
RFX1P22670 AC021146.8-201ENST00000507455 733 ntBASIC8.25□□□□□ -1.09
RFX1P22670 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC8.25□□□□□ -1.09
RFX1P22670 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC8.25□□□□□ -1.09
RFX1P22670 AC083923.1-201ENST00000523708 376 ntBASIC8.25□□□□□ -1.09
RFX1P22670 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC8.25□□□□□ -1.09
RFX1P22670 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC8.25□□□□□ -1.09
RFX1P22670 SSU72P6-201ENST00000532644 488 ntBASIC8.25□□□□□ -1.09
RFX1P22670 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC8.25□□□□□ -1.09
RFX1P22670 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC8.25□□□□□ -1.09
RFX1P22670 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC8.25□□□□□ -1.09
RFX1P22670 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC8.25□□□□□ -1.09
RFX1P22670 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC8.25□□□□□ -1.09
RFX1P22670 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC8.25□□□□□ -1.09
RFX1P22670 AP006587.6-201ENST00000582128 1091 ntBASIC8.25□□□□□ -1.09
RFX1P22670 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC8.25□□□□□ -1.09
RFX1P22670 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RFX1P22670 AC060766.6-201ENST00000589099 394 ntTSL 3 BASIC8.25□□□□□ -1.09
RFX1P22670 AL139286.2-201ENST00000606838 396 ntBASIC8.25□□□□□ -1.09
RFX1P22670 AL451054.1-201ENST00000621770 772 ntBASIC8.25□□□□□ -1.09
RFX1P22670 AC007342.8-201ENST00000623278 678 ntBASIC8.25□□□□□ -1.09
RFX1P22670 ASB8-218ENST00000629941 278 ntTSL 5 BASIC8.25□□□□□ -1.09
RFX1P22670 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC8.25□□□□□ -1.09
RFX1P22670 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC8.25□□□□□ -1.09
RFX1P22670 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC8.25□□□□□ -1.09
RFX1P22670 PWRN1-212ENST00000569908 1435 ntBASIC8.25□□□□□ -1.09
RFX1P22670 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC8.25□□□□□ -1.09
RFX1P22670 AC010886.1-201ENST00000437380 2869 ntBASIC8.25□□□□□ -1.09
RFX1P22670 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RFX1P22670 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC8.25□□□□□ -1.09
RFX1P22670 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
RFX1P22670 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC8.25□□□□□ -1.09
RFX1P22670 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RFX1P22670 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC8.25□□□□□ -1.09
RFX1P22670 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC8.25□□□□□ -1.09
RFX1P22670 SLC2A3P4-201ENST00000521259 1471 ntBASIC8.25□□□□□ -1.09
RFX1P22670 AC090132.1-201ENST00000524071 1480 ntBASIC8.25□□□□□ -1.09
RFX1P22670 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC8.25□□□□□ -1.09
RFX1P22670 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RFX1P22670 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC8.25□□□□□ -1.09
RFX1P22670 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RFX1P22670 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RFX1P22670 AC245100.2-201ENST00000454544 1679 ntBASIC8.24□□□□□ -1.09
RFX1P22670 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
RFX1P22670 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
RFX1P22670 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RFX1P22670 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RFX1P22670 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC8.24□□□□□ -1.09
RFX1P22670 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RFX1P22670 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RFX1P22670 OR51A10P-201ENST00000307165 937 ntBASIC8.24□□□□□ -1.09
RFX1P22670 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
RFX1P22670 RNA5SP389-201ENST00000362610 115 ntBASIC8.24□□□□□ -1.09
RFX1P22670 RNA5SP226-201ENST00000362653 115 ntBASIC8.24□□□□□ -1.09
RFX1P22670 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RFX1P22670 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
RFX1P22670 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
RFX1P22670 AC093719.1-202ENST00000392735 373 ntBASIC8.24□□□□□ -1.09
RFX1P22670 CREM-214ENST00000395887 849 ntTSL 5 BASIC8.24□□□□□ -1.09
RFX1P22670 OR6C64P-201ENST00000419708 825 ntBASIC8.24□□□□□ -1.09
RFX1P22670 PAICSP7-201ENST00000419829 962 ntBASIC8.24□□□□□ -1.09
RFX1P22670 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC8.24□□□□□ -1.09
RFX1P22670 AC006366.1-201ENST00000422002 759 ntBASIC8.24□□□□□ -1.09
RFX1P22670 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC8.24□□□□□ -1.09
RFX1P22670 VN1R35P-201ENST00000428102 693 ntBASIC8.24□□□□□ -1.09
RFX1P22670 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC8.24□□□□□ -1.09
RFX1P22670 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC8.24□□□□□ -1.09
RFX1P22670 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC8.24□□□□□ -1.09
RFX1P22670 FO393419.1-201ENST00000443746 355 ntBASIC8.24□□□□□ -1.09
RFX1P22670 AC092570.2-201ENST00000452117 1143 ntBASIC8.24□□□□□ -1.09
RFX1P22670 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC8.24□□□□□ -1.09
RFX1P22670 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC8.24□□□□□ -1.09
RFX1P22670 MEF2AP1-201ENST00000454867 863 ntBASIC8.24□□□□□ -1.09
RFX1P22670 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC8.24□□□□□ -1.09
RFX1P22670 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC8.24□□□□□ -1.09
RFX1P22670 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms