Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 ICE2P1-201ENST00000512800 1849 ntBASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 RN7SKP130-201ENST00000364924 301 ntBASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 IGLV3-4-201ENST00000432300 244 ntBASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 AC114402.2-201ENST00000432760 643 ntBASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 NPM1P19-201ENST00000450070 712 ntBASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 AC112187.1-201ENST00000455837 479 ntBASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 RN7SL352P-201ENST00000466002 277 ntBASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 RPA2P3-201ENST00000533268 770 ntBASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 PDCL3P1-201ENST00000534575 734 ntBASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 AC245052.7-201ENST00000601161 359 ntBASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 HBG1-202ENST00000632727 369 ntTSL 3 BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 AC073869.7-201ENST00000640874 297 ntBASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 HDAC1P2-201ENST00000453661 1398 ntBASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 EEF1A1P28-201ENST00000450915 1403 ntBASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 RNA5SP355-201ENST00000365317 135 ntBASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 RNA5SP279-201ENST00000365513 117 ntBASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 EI24P3-201ENST00000399046 1062 ntBASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 NACAP7-201ENST00000407371 609 ntBASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 AL121878.1-201ENST00000418638 859 ntBASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 AC000089.1-201ENST00000424559 801 ntBASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 AL731534.1-201ENST00000434711 269 ntBASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 AC005517.1-201ENST00000452091 489 ntBASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 OSTCP1-201ENST00000455507 450 ntBASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 EIF4EP5-201ENST00000528228 640 ntBASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 OR6M2P-201ENST00000529831 871 ntBASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 AC023968.1-201ENST00000560719 475 ntBASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 MIR5682-201ENST00000584864 76 ntBASIC5.18□□□□□ -1.58
KCNIP3Q9Y2W7 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms