Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 SNORD8-201ENST00000363915 110 ntBASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 AC007568.1-201ENST00000422912 471 ntBASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 AC130360.1-201ENST00000425489 1117 ntBASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 AC007679.3-201ENST00000434035 414 ntBASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 AC023141.3-201ENST00000436698 278 ntBASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 AC002553.3-201ENST00000453002 341 ntBASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 PPIAP7-201ENST00000454070 489 ntBASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 AC073594.1-201ENST00000462065 364 ntBASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 RN7SKP248-201ENST00000516278 305 ntBASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 RN7SKP35-201ENST00000517210 151 ntBASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 AC009879.1-201ENST00000520029 839 ntBASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 AC130365.2-201ENST00000525882 1201 ntBASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 AP000620.1-201ENST00000527147 504 ntBASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 AC007346.1-201ENST00000569208 867 ntBASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 AC073333.2-201ENST00000603589 769 ntBASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 AL512652.1-201ENST00000619006 500 ntBASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 FAM27E2-201ENST00000619668 403 ntBASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 AL137067.2-201ENST00000621202 131 ntBASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 AP001885.1-201ENST00000621658 558 ntBASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 AC018659.2-201ENST00000624690 715 ntBASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 AC003992.1-201ENST00000635364 557 ntBASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 USP9YP3-201ENST00000434481 1766 ntBASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 AC009135.2-201ENST00000624136 1768 ntBASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 AC024587.1-201ENST00000505925 2157 ntBASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 MAPK10-270ENST00000641102 3538 ntBASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 SNORA21-201ENST00000362423 132 ntBASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 VN1R12P-201ENST00000403778 876 ntBASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 RNA5SP156-201ENST00000410250 110 ntBASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 PNKDP1-201ENST00000435914 430 ntBASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 AC097463.1-201ENST00000447288 481 ntBASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 CR383658.1-201ENST00000514609 734 ntBASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 AC002310.3-201ENST00000569728 723 ntBASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 RNU4ATAC-201ENST00000580972 127 ntBASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 MIR4271-201ENST00000582451 67 ntBASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 AC091167.5-201ENST00000605689 894 ntBASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 AP001052.1-201ENST00000626421 99 ntBASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 AP004289.1-201ENST00000436307 2205 ntBASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 AC104966.1-201ENST00000467010 1464 ntBASIC5.71□□□□□ -1.5
C9orf40Q8IXQ3 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 AC092724.1-201ENST00000624623 3397 ntBASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 AC022325.1-201ENST00000502748 2199 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms