Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 AL049869.1-201ENST00000556933 1402 ntBASIC5.69□□□□□ -1.5
LPCAT4Q643R3 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 RN7SKP130-201ENST00000364924 301 ntBASIC5.69□□□□□ -1.5
LPCAT4Q643R3 RN7SKP69-201ENST00000365390 305 ntBASIC5.69□□□□□ -1.5
LPCAT4Q643R3 RNA5SP187-201ENST00000384400 119 ntBASIC5.69□□□□□ -1.5
LPCAT4Q643R3 RNU1-56P-201ENST00000391303 164 ntBASIC5.69□□□□□ -1.5
LPCAT4Q643R3 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 AC121334.1-201ENST00000396414 802 ntBASIC5.69□□□□□ -1.5
LPCAT4Q643R3 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 MIR1231-201ENST00000408101 92 ntBASIC5.69□□□□□ -1.5
LPCAT4Q643R3 RN7SKP30-201ENST00000411373 334 ntBASIC5.69□□□□□ -1.5
LPCAT4Q643R3 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 AC079809.1-201ENST00000415468 276 ntBASIC5.69□□□□□ -1.5
LPCAT4Q643R3 AC091492.1-201ENST00000419844 272 ntBASIC5.69□□□□□ -1.5
LPCAT4Q643R3 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 AL596268.1-201ENST00000427910 1048 ntBASIC5.69□□□□□ -1.5
LPCAT4Q643R3 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 AL663074.2-201ENST00000440621 479 ntBASIC5.69□□□□□ -1.5
LPCAT4Q643R3 AL353803.3-201ENST00000444641 335 ntBASIC5.69□□□□□ -1.5
LPCAT4Q643R3 AC023271.1-201ENST00000445936 1090 ntBASIC5.69□□□□□ -1.5
LPCAT4Q643R3 FRG2FP-204ENST00000453982 852 ntBASIC5.69□□□□□ -1.5
LPCAT4Q643R3 RN7SL197P-201ENST00000466981 299 ntBASIC5.69□□□□□ -1.5
LPCAT4Q643R3 CBX5P1-201ENST00000468470 561 ntBASIC5.69□□□□□ -1.5
LPCAT4Q643R3 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 PDCL3P4-201ENST00000489621 720 ntBASIC5.69□□□□□ -1.5
LPCAT4Q643R3 AC105420.1-201ENST00000504389 582 ntBASIC5.69□□□□□ -1.5
LPCAT4Q643R3 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 AP005902.2-201ENST00000518393 307 ntBASIC5.69□□□□□ -1.5
LPCAT4Q643R3 IGHVII-51-2-201ENST00000519778 259 ntBASIC5.69□□□□□ -1.5
LPCAT4Q643R3 AC078899.1-201ENST00000521432 1185 ntBASIC5.69□□□□□ -1.5
LPCAT4Q643R3 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 MIR5682-201ENST00000584864 76 ntBASIC5.69□□□□□ -1.5
LPCAT4Q643R3 AC005332.4-201ENST00000592752 579 ntBASIC5.69□□□□□ -1.5
LPCAT4Q643R3 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 LINC02495-203ENST00000636704 242 ntBASIC5.69□□□□□ -1.5
LPCAT4Q643R3 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.69□□□□□ -1.5
LPCAT4Q643R3 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 OR2A3P-202ENST00000641249 1776 ntBASIC5.69□□□□□ -1.5
LPCAT4Q643R3 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 AC018809.2-201ENST00000602436 3823 ntBASIC5.69□□□□□ -1.5
LPCAT4Q643R3 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.69□□□□□ -1.5
LPCAT4Q643R3 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.68□□□□□ -1.5
LPCAT4Q643R3 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.68□□□□□ -1.5
LPCAT4Q643R3 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LPCAT4Q643R3 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.68□□□□□ -1.5
LPCAT4Q643R3 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.68□□□□□ -1.5
LPCAT4Q643R3 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
LPCAT4Q643R3 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LPCAT4Q643R3 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.68□□□□□ -1.5
LPCAT4Q643R3 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LPCAT4Q643R3 AC006600.2-201ENST00000624834 2506 ntBASIC5.68□□□□□ -1.5
LPCAT4Q643R3 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.68□□□□□ -1.5
LPCAT4Q643R3 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.68□□□□□ -1.5
LPCAT4Q643R3 RN7SKP145-201ENST00000363291 303 ntBASIC5.68□□□□□ -1.5
LPCAT4Q643R3 Y_RNA.209-201ENST00000364156 111 ntBASIC5.68□□□□□ -1.5
LPCAT4Q643R3 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.68□□□□□ -1.5
LPCAT4Q643R3 MRPS6P2-201ENST00000381143 370 ntBASIC5.68□□□□□ -1.5
LPCAT4Q643R3 MIR187-201ENST00000385062 109 ntBASIC5.68□□□□□ -1.5
LPCAT4Q643R3 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
LPCAT4Q643R3 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
LPCAT4Q643R3 SNORA11D-201ENST00000408548 128 ntBASIC5.68□□□□□ -1.5
LPCAT4Q643R3 SNORA11E-201ENST00000408778 128 ntBASIC5.68□□□□□ -1.5
LPCAT4Q643R3 RANP6-201ENST00000413691 644 ntBASIC5.68□□□□□ -1.5
LPCAT4Q643R3 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC5.68□□□□□ -1.5
LPCAT4Q643R3 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.68□□□□□ -1.5
LPCAT4Q643R3 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.68□□□□□ -1.5
LPCAT4Q643R3 GAPDHP23-201ENST00000444823 993 ntBASIC5.68□□□□□ -1.5
LPCAT4Q643R3 MORF4-201ENST00000447135 971 ntBASIC5.68□□□□□ -1.5
LPCAT4Q643R3 RPS23P9-201ENST00000448848 438 ntBASIC5.68□□□□□ -1.5
LPCAT4Q643R3 RARRES2P3-201ENST00000457739 473 ntBASIC5.68□□□□□ -1.5
LPCAT4Q643R3 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC5.68□□□□□ -1.5
LPCAT4Q643R3 RN7SL714P-201ENST00000487050 298 ntBASIC5.68□□□□□ -1.5
LPCAT4Q643R3 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.68□□□□□ -1.5
LPCAT4Q643R3 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LPCAT4Q643R3 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.68□□□□□ -1.5
LPCAT4Q643R3 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.68□□□□□ -1.5
LPCAT4Q643R3 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.68□□□□□ -1.5
LPCAT4Q643R3 NF1P12-201ENST00000549593 583 ntBASIC5.68□□□□□ -1.5
LPCAT4Q643R3 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
LPCAT4Q643R3 AC026956.1-201ENST00000558741 396 ntBASIC5.68□□□□□ -1.5
LPCAT4Q643R3 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms