Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.86□□□□□ -1.31
COPB1P53618 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COPB1P53618 RN7SL32P-201ENST00000580514 281 ntBASIC6.86□□□□□ -1.31
COPB1P53618 RN7SL66P-201ENST00000582099 264 ntBASIC6.86□□□□□ -1.31
COPB1P53618 SYPL1P2-201ENST00000582878 727 ntBASIC6.86□□□□□ -1.31
COPB1P53618 ADAD1P2-201ENST00000588476 646 ntBASIC6.86□□□□□ -1.31
COPB1P53618 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.86□□□□□ -1.31
COPB1P53618 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.86□□□□□ -1.31
COPB1P53618 MIR6889-201ENST00000613185 59 ntBASIC6.86□□□□□ -1.31
COPB1P53618 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COPB1P53618 AC020978.9-201ENST00000624380 1141 ntBASIC6.86□□□□□ -1.31
COPB1P53618 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.86□□□□□ -1.31
COPB1P53618 AC004023.1-201ENST00000561473 1744 ntBASIC6.86□□□□□ -1.31
COPB1P53618 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COPB1P53618 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COPB1P53618 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
COPB1P53618 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
COPB1P53618 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
COPB1P53618 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
COPB1P53618 AL731532.1-201ENST00000623972 4236 ntBASIC6.86□□□□□ -1.31
COPB1P53618 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.86□□□□□ -1.31
COPB1P53618 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COPB1P53618 MIPEPP2-201ENST00000422560 1819 ntBASIC6.85□□□□□ -1.31
COPB1P53618 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
COPB1P53618 SNX18P3-202ENST00000565670 1750 ntBASIC6.85□□□□□ -1.31
COPB1P53618 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.85□□□□□ -1.31
COPB1P53618 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
COPB1P53618 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.85□□□□□ -1.31
COPB1P53618 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COPB1P53618 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
COPB1P53618 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
COPB1P53618 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COPB1P53618 SNORA81-201ENST00000408493 178 ntBASIC6.85□□□□□ -1.31
COPB1P53618 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.85□□□□□ -1.31
COPB1P53618 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.85□□□□□ -1.31
COPB1P53618 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.85□□□□□ -1.31
COPB1P53618 AC016908.1-201ENST00000442571 1219 ntBASIC6.85□□□□□ -1.31
COPB1P53618 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.85□□□□□ -1.31
COPB1P53618 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.85□□□□□ -1.31
COPB1P53618 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.85□□□□□ -1.31
COPB1P53618 AC005165.2-201ENST00000466070 380 ntBASIC6.85□□□□□ -1.31
COPB1P53618 AC092349.1-201ENST00000504903 310 ntBASIC6.85□□□□□ -1.31
COPB1P53618 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.85□□□□□ -1.31
COPB1P53618 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.85□□□□□ -1.31
COPB1P53618 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.85□□□□□ -1.31
COPB1P53618 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.85□□□□□ -1.31
COPB1P53618 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.85□□□□□ -1.31
COPB1P53618 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.85□□□□□ -1.31
COPB1P53618 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.85□□□□□ -1.31
COPB1P53618 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.85□□□□□ -1.31
COPB1P53618 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.85□□□□□ -1.31
COPB1P53618 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.85□□□□□ -1.31
COPB1P53618 RPL7AP69-201ENST00000595306 806 ntBASIC6.85□□□□□ -1.31
COPB1P53618 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.85□□□□□ -1.31
COPB1P53618 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.85□□□□□ -1.31
COPB1P53618 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.85□□□□□ -1.31
COPB1P53618 AL391597.1-201ENST00000618707 694 ntBASIC6.85□□□□□ -1.31
COPB1P53618 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
COPB1P53618 AC104820.1-201ENST00000624183 307 ntBASIC6.85□□□□□ -1.31
COPB1P53618 AL356094.1-201ENST00000624663 1212 ntBASIC6.85□□□□□ -1.31
COPB1P53618 AC080188.3-201ENST00000624842 748 ntBASIC6.85□□□□□ -1.31
COPB1P53618 AL138960.2-201ENST00000625145 535 ntBASIC6.85□□□□□ -1.31
COPB1P53618 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.85□□□□□ -1.31
COPB1P53618 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.85□□□□□ -1.31
COPB1P53618 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.85□□□□□ -1.31
COPB1P53618 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COPB1P53618 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COPB1P53618 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.85□□□□□ -1.31
COPB1P53618 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.85□□□□□ -1.31
COPB1P53618 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COPB1P53618 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COPB1P53618 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COPB1P53618 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COPB1P53618 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
COPB1P53618 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
COPB1P53618 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COPB1P53618 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COPB1P53618 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
COPB1P53618 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COPB1P53618 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.84□□□□□ -1.31
COPB1P53618 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
COPB1P53618 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.84□□□□□ -1.31
COPB1P53618 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.84□□□□□ -1.31
COPB1P53618 AC092634.1-201ENST00000366505 199 ntBASIC6.84□□□□□ -1.31
COPB1P53618 GNG5P2-201ENST00000372054 207 ntBASIC6.84□□□□□ -1.31
COPB1P53618 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COPB1P53618 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.84□□□□□ -1.31
COPB1P53618 AC017035.1-201ENST00000411999 1115 ntBASIC6.84□□□□□ -1.31
COPB1P53618 AC006509.1-201ENST00000420788 634 ntBASIC6.84□□□□□ -1.31
COPB1P53618 HSFY1P1-201ENST00000423928 1178 ntBASIC6.84□□□□□ -1.31
COPB1P53618 AC245884.2-201ENST00000426257 404 ntBASIC6.84□□□□□ -1.31
COPB1P53618 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.84□□□□□ -1.31
COPB1P53618 AC096632.2-201ENST00000438139 1239 ntBASIC6.84□□□□□ -1.31
COPB1P53618 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.84□□□□□ -1.31
COPB1P53618 MORF4-201ENST00000447135 971 ntBASIC6.84□□□□□ -1.31
COPB1P53618 AL513343.1-201ENST00000451818 792 ntBASIC6.84□□□□□ -1.31
COPB1P53618 MTND2P39-201ENST00000457230 764 ntBASIC6.84□□□□□ -1.31
COPB1P53618 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
COPB1P53618 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC6.84□□□□□ -1.31
COPB1P53618 RN7SL741P-201ENST00000482473 289 ntBASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms