Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC005077.1-201ENST00000449226 375 ntBASIC6.75□□□□□ -1.33
VTNP04004 RN7SL221P-201ENST00000466190 281 ntBASIC6.75□□□□□ -1.33
VTNP04004 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC6.75□□□□□ -1.33
VTNP04004 RN7SL193P-201ENST00000491708 276 ntBASIC6.75□□□□□ -1.33
VTNP04004 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC6.75□□□□□ -1.33
VTNP04004 IGKV3D-34-201ENST00000522638 302 ntBASIC6.75□□□□□ -1.33
VTNP04004 RPA2P3-201ENST00000533268 770 ntBASIC6.75□□□□□ -1.33
VTNP04004 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.75□□□□□ -1.33
VTNP04004 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.75□□□□□ -1.33
VTNP04004 AL512356.3-201ENST00000623005 461 ntBASIC6.75□□□□□ -1.33
VTNP04004 AC022726.2-201ENST00000634673 547 ntBASIC6.75□□□□□ -1.33
VTNP04004 AC011815.2-201ENST00000618230 2021 ntBASIC6.75□□□□□ -1.33
VTNP04004 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.75□□□□□ -1.33
VTNP04004 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
VTNP04004 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VTNP04004 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.75□□□□□ -1.33
VTNP04004 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
VTNP04004 AC241584.2-201ENST00000637142 2090 ntBASIC6.75□□□□□ -1.33
VTNP04004 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
VTNP04004 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VTNP04004 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
VTNP04004 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.75□□□□□ -1.33
VTNP04004 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VTNP04004 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
VTNP04004 AF287957.1-201ENST00000607368 1595 ntBASIC6.74□□□□□ -1.33
VTNP04004 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VTNP04004 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.74□□□□□ -1.33
VTNP04004 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.74□□□□□ -1.33
VTNP04004 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
VTNP04004 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.74□□□□□ -1.33
VTNP04004 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VTNP04004 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
VTNP04004 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VTNP04004 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
VTNP04004 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VTNP04004 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
VTNP04004 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
VTNP04004 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VTNP04004 AC023490.2-201ENST00000359859 470 ntBASIC6.74□□□□□ -1.33
VTNP04004 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VTNP04004 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.74□□□□□ -1.33
VTNP04004 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.74□□□□□ -1.33
VTNP04004 AL512593.1-201ENST00000444758 779 ntBASIC6.74□□□□□ -1.33
VTNP04004 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.74□□□□□ -1.33
VTNP04004 SETP20-201ENST00000457046 852 ntBASIC6.74□□□□□ -1.33
VTNP04004 ACA64.1-201ENST00000459171 127 ntBASIC6.74□□□□□ -1.33
VTNP04004 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VTNP04004 RNA5SP271-201ENST00000516700 88 ntBASIC6.74□□□□□ -1.33
VTNP04004 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.74□□□□□ -1.33
VTNP04004 IGLVIV-64-201ENST00000518581 301 ntBASIC6.74□□□□□ -1.33
VTNP04004 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VTNP04004 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.74□□□□□ -1.33
VTNP04004 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VTNP04004 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.74□□□□□ -1.33
VTNP04004 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.74□□□□□ -1.33
VTNP04004 AC090236.2-201ENST00000587933 1101 ntBASIC6.74□□□□□ -1.33
VTNP04004 NPIPB1P-202ENST00000588786 828 ntBASIC6.74□□□□□ -1.33
VTNP04004 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.74□□□□□ -1.33
VTNP04004 AC141002.1-201ENST00000607025 279 ntBASIC6.74□□□□□ -1.33
VTNP04004 MIR6809-201ENST00000612189 116 ntBASIC6.74□□□□□ -1.33
VTNP04004 MIR6729-201ENST00000618194 65 ntBASIC6.74□□□□□ -1.33
VTNP04004 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.74□□□□□ -1.33
VTNP04004 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VTNP04004 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VTNP04004 AC097634.1-201ENST00000604491 2467 ntBASIC6.74□□□□□ -1.33
VTNP04004 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
VTNP04004 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.74□□□□□ -1.33
VTNP04004 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
VTNP04004 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
VTNP04004 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VTNP04004 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.74□□□□□ -1.33
VTNP04004 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.74□□□□□ -1.33
VTNP04004 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VTNP04004 AC011369.2-201ENST00000624423 1567 ntBASIC6.74□□□□□ -1.33
VTNP04004 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
VTNP04004 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VTNP04004 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VTNP04004 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VTNP04004 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.73□□□□□ -1.33
VTNP04004 HDAC1P2-201ENST00000453661 1398 ntBASIC6.73□□□□□ -1.33
VTNP04004 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VTNP04004 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
VTNP04004 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
VTNP04004 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
VTNP04004 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VTNP04004 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
VTNP04004 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VTNP04004 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VTNP04004 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
VTNP04004 RNA5SP435-201ENST00000364044 108 ntBASIC6.73□□□□□ -1.33
VTNP04004 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.73□□□□□ -1.33
VTNP04004 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.73□□□□□ -1.33
VTNP04004 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.73□□□□□ -1.33
VTNP04004 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.73□□□□□ -1.33
VTNP04004 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.73□□□□□ -1.33
VTNP04004 NDUFS5P5-201ENST00000437256 321 ntBASIC6.73□□□□□ -1.33
VTNP04004 AC104109.1-201ENST00000498563 436 ntBASIC6.73□□□□□ -1.33
VTNP04004 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
VTNP04004 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.73□□□□□ -1.33
VTNP04004 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms