Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 VTRNA3-1P-201ENST00000362552 102 ntBASIC4.62□□□□□ -1.67
HLA-DQA1P01909 RN7SKP77-201ENST00000363261 353 ntBASIC4.62□□□□□ -1.67
HLA-DQA1P01909 RNA5SP114-201ENST00000363780 113 ntBASIC4.62□□□□□ -1.67
HLA-DQA1P01909 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 FDPSP5-201ENST00000399474 1057 ntBASIC4.62□□□□□ -1.67
HLA-DQA1P01909 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 SNORA11D-201ENST00000408548 128 ntBASIC4.62□□□□□ -1.67
HLA-DQA1P01909 SNORA11E-201ENST00000408778 128 ntBASIC4.62□□□□□ -1.67
HLA-DQA1P01909 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 AC092646.1-201ENST00000427142 901 ntBASIC4.62□□□□□ -1.67
HLA-DQA1P01909 AC009362.1-201ENST00000427253 406 ntBASIC4.62□□□□□ -1.67
HLA-DQA1P01909 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 RPSAP41-201ENST00000439695 860 ntBASIC4.62□□□□□ -1.67
HLA-DQA1P01909 AC027124.1-201ENST00000440852 466 ntBASIC4.62□□□□□ -1.67
HLA-DQA1P01909 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 AC005517.1-201ENST00000452091 489 ntBASIC4.62□□□□□ -1.67
HLA-DQA1P01909 OR7E7P-201ENST00000455678 1012 ntBASIC4.62□□□□□ -1.67
HLA-DQA1P01909 RN7SL492P-201ENST00000460700 295 ntBASIC4.62□□□□□ -1.67
HLA-DQA1P01909 AF305872.1-201ENST00000485217 471 ntBASIC4.62□□□□□ -1.67
HLA-DQA1P01909 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 OR52H2P-201ENST00000514607 902 ntBASIC4.62□□□□□ -1.67
HLA-DQA1P01909 MTCYBP44-201ENST00000514835 823 ntBASIC4.62□□□□□ -1.67
HLA-DQA1P01909 AC107952.1-201ENST00000524200 376 ntBASIC4.62□□□□□ -1.67
HLA-DQA1P01909 AC021820.1-201ENST00000525564 808 ntBASIC4.62□□□□□ -1.67
HLA-DQA1P01909 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 MIR4800-201ENST00000537353 80 ntBASIC4.62□□□□□ -1.67
HLA-DQA1P01909 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 TXNP4-201ENST00000575018 310 ntBASIC4.62□□□□□ -1.67
HLA-DQA1P01909 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 AC090616.1-201ENST00000583895 447 ntBASIC4.62□□□□□ -1.67
HLA-DQA1P01909 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 AC018690.1-201ENST00000608144 626 ntBASIC4.62□□□□□ -1.67
HLA-DQA1P01909 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 MIR665-201ENST00000635949 72 ntBASIC4.62□□□□□ -1.67
HLA-DQA1P01909 AC140479.4-205ENST00000636339 820 ntBASIC4.62□□□□□ -1.67
HLA-DQA1P01909 AC243725.1-201ENST00000637164 436 ntBASIC4.62□□□□□ -1.67
HLA-DQA1P01909 AL359091.1-201ENST00000449048 1734 ntBASIC4.62□□□□□ -1.67
HLA-DQA1P01909 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 AC005224.3-201ENST00000584683 2140 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 AC009962.1-201ENST00000567327 3813 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 AP001029.2-203ENST00000589795 4910 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 AL359694.1-201ENST00000403247 604 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 RN7SKP117-201ENST00000410175 264 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 OR52N3P-201ENST00000413417 934 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 HMGN2P27-201ENST00000427352 270 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 AL596268.1-201ENST00000427910 1048 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 RPS10P14-201ENST00000440748 502 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 SNRPBP1-201ENST00000443634 282 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 SRP68P2-201ENST00000456184 254 ntBASIC4.61□□□□□ -1.67
HLA-DQA1P01909 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC4.61□□□□□ -1.67
HLA-DQA1P01909 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms