Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC044797.1-201ENST00000445744 679 ntBASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 Z73417.1-201ENST00000447373 778 ntBASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 AC083806.1-201ENST00000468934 316 ntBASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 STRADBP1-201ENST00000478954 1281 ntBASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 AC018639.1-201ENST00000492994 442 ntBASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 RN7SL143P-201ENST00000496780 297 ntBASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 MTCO1P31-201ENST00000506355 492 ntBASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 RNU6-319P-201ENST00000516025 108 ntBASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 RNA5SP318-201ENST00000516352 92 ntBASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 OR9L1P-201ENST00000529493 933 ntBASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 OR7E19P-202ENST00000589942 844 ntBASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 AC069304.3-201ENST00000603938 1084 ntBASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 AP002791.1-201ENST00000623291 381 ntBASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 AL512329.1-201ENST00000404600 1592 ntBASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 CREM-216ENST00000429130 1476 ntTSL 5 BASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 SLC2A3P4-201ENST00000521259 1471 ntBASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 AC079949.2-201ENST00000617117 2933 ntBASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
PPARGC1AQ9UBK2 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 RNA5SP442-201ENST00000365050 107 ntBASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 SNORD116-2-201ENST00000384274 95 ntBASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 SNORD116-6-201ENST00000384711 96 ntBASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 AP002530.1-201ENST00000405705 684 ntBASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 RPS6P15-201ENST00000431996 751 ntBASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 SNRPFP2-201ENST00000440710 251 ntBASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 RPL7P55-201ENST00000450522 746 ntBASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 RPL7AP71-201ENST00000451120 739 ntBASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 RARRES2P3-201ENST00000457739 473 ntBASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 RN7SL259P-201ENST00000478499 253 ntBASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 AC021220.1-201ENST00000507445 630 ntBASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 ASNSP4-201ENST00000511103 447 ntBASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 MTCYBP44-201ENST00000514835 823 ntBASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 AC096661.1-201ENST00000515870 822 ntBASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 AL591767.3-201ENST00000554632 525 ntBASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 OR4U1P-201ENST00000554958 912 ntBASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 AC145350.1-201ENST00000567426 208 ntBASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 SNORA70D-201ENST00000578836 135 ntBASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 AC020914.7-201ENST00000594477 545 ntBASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 AL022067.1-201ENST00000602426 454 ntBASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 CYCSP1-201ENST00000604815 315 ntBASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 FRG1DP-201ENST00000635586 771 ntBASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 AC017104.5-201ENST00000637647 639 ntBASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 AC008691.1-209ENST00000642094 814 ntBASIC7.1□□□□□ -1.27
PPARGC1AQ9UBK2 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms