Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 MIR6780B-201ENST00000610307 79 ntBASIC6.58□□□□□ -1.36
CCM2LQ9NUG4 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC6.58□□□□□ -1.36
CCM2LQ9NUG4 BNIP3P41-202ENST00000616656 861 ntBASIC6.58□□□□□ -1.36
CCM2LQ9NUG4 CYCSP41-201ENST00000616920 296 ntBASIC6.58□□□□□ -1.36
CCM2LQ9NUG4 AC006453.3-201ENST00000635891 377 ntBASIC6.58□□□□□ -1.36
CCM2LQ9NUG4 AC083865.1-201ENST00000636634 831 ntBASIC6.58□□□□□ -1.36
CCM2LQ9NUG4 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.58□□□□□ -1.36
CCM2LQ9NUG4 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCM2LQ9NUG4 API5P1-201ENST00000424316 1510 ntBASIC6.58□□□□□ -1.36
CCM2LQ9NUG4 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCM2LQ9NUG4 KARSP1-201ENST00000451871 1752 ntBASIC6.58□□□□□ -1.36
CCM2LQ9NUG4 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCM2LQ9NUG4 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCM2LQ9NUG4 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCM2LQ9NUG4 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCM2LQ9NUG4 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCM2LQ9NUG4 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.58□□□□□ -1.36
CCM2LQ9NUG4 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCM2LQ9NUG4 DDX50P1-201ENST00000438163 2400 ntBASIC6.58□□□□□ -1.36
CCM2LQ9NUG4 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCM2LQ9NUG4 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.58□□□□□ -1.36
CCM2LQ9NUG4 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 RPL24P4-201ENST00000326586 421 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 RNA5SP396-201ENST00000364834 120 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AP002784.2-201ENST00000397300 549 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AC113608.1-201ENST00000398740 305 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 RNU4-64P-201ENST00000410795 131 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AL355862.1-201ENST00000412705 353 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 RPS26P13-201ENST00000419030 330 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AC092447.3-201ENST00000426027 686 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 RPS7P2-201ENST00000435134 607 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AL451136.1-201ENST00000435399 325 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AC009237.1-201ENST00000442127 744 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AL356121.1-201ENST00000442911 156 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 RPS27P5-201ENST00000444247 244 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 MTND2P8-201ENST00000450555 1025 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AC009244.1-201ENST00000450566 258 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 ZNF736P8Y-201ENST00000451913 669 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 RPL21P18-201ENST00000469899 480 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AC020779.1-201ENST00000478757 796 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 RN7SL267P-201ENST00000485107 261 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 HMGB1P38-201ENST00000490557 577 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AC011352.2-201ENST00000514574 1016 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 RN7SKP265-201ENST00000516448 223 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 HAUS1P3-201ENST00000523909 662 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 SETP17-201ENST00000534163 817 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 OR8K4P-201ENST00000534608 872 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AC084824.2-201ENST00000548906 345 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AC023825.1-201ENST00000566704 1030 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 OR5AH1P-201ENST00000595968 283 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AL606834.3-201ENST00000602615 496 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AL390058.1-201ENST00000603834 629 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AC108451.2-201ENST00000603875 538 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AP002802.2-201ENST00000605877 235 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AC067838.1-201ENST00000606064 577 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AC012640.3-201ENST00000607847 430 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 U91328.4-201ENST00000608919 517 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AC243830.2-201ENST00000618067 630 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 AC048344.4-201ENST00000619744 527 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 SNX18P10-201ENST00000625014 519 ntBASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.57□□□□□ -1.36
CCM2LQ9NUG4 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms