Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.53□□□□□ -1.36
SIX2Q9NPC8 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
SIX2Q9NPC8 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SIX2Q9NPC8 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SIX2Q9NPC8 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
SIX2Q9NPC8 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SIX2Q9NPC8 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.53□□□□□ -1.36
SIX2Q9NPC8 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SIX2Q9NPC8 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SIX2Q9NPC8 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SIX2Q9NPC8 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SIX2Q9NPC8 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
SIX2Q9NPC8 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
SIX2Q9NPC8 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
SIX2Q9NPC8 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
SIX2Q9NPC8 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SIX2Q9NPC8 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.52□□□□□ -1.37
SIX2Q9NPC8 AL121578.1-201ENST00000428051 892 ntBASIC6.52□□□□□ -1.37
SIX2Q9NPC8 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SIX2Q9NPC8 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.52□□□□□ -1.37
SIX2Q9NPC8 RPSAP32-201ENST00000432681 526 ntBASIC6.52□□□□□ -1.37
SIX2Q9NPC8 GAPDHP59-201ENST00000435908 267 ntBASIC6.52□□□□□ -1.37
SIX2Q9NPC8 AL390879.1-201ENST00000439143 386 ntBASIC6.52□□□□□ -1.37
SIX2Q9NPC8 AC002553.3-201ENST00000453002 341 ntBASIC6.52□□□□□ -1.37
SIX2Q9NPC8 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.52□□□□□ -1.37
SIX2Q9NPC8 RPL29P23-201ENST00000486188 442 ntBASIC6.52□□□□□ -1.37
SIX2Q9NPC8 CCDC11P1-201ENST00000503137 1162 ntBASIC6.52□□□□□ -1.37
SIX2Q9NPC8 OR7E99P-201ENST00000505750 922 ntBASIC6.52□□□□□ -1.37
SIX2Q9NPC8 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC6.52□□□□□ -1.37
SIX2Q9NPC8 CR383658.1-201ENST00000514609 734 ntBASIC6.52□□□□□ -1.37
SIX2Q9NPC8 RNA5SP116-201ENST00000516132 98 ntBASIC6.52□□□□□ -1.37
SIX2Q9NPC8 OR7E158P-201ENST00000524483 910 ntBASIC6.52□□□□□ -1.37
SIX2Q9NPC8 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.52□□□□□ -1.37
SIX2Q9NPC8 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.52□□□□□ -1.37
SIX2Q9NPC8 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.52□□□□□ -1.37
SIX2Q9NPC8 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.52□□□□□ -1.37
SIX2Q9NPC8 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.52□□□□□ -1.37
SIX2Q9NPC8 uc_338.26-201ENST00000612659 160 ntBASIC6.52□□□□□ -1.37
SIX2Q9NPC8 uc_338.29-201ENST00000615099 168 ntBASIC6.52□□□□□ -1.37
SIX2Q9NPC8 AL355974.3-201ENST00000617383 467 ntBASIC6.52□□□□□ -1.37
SIX2Q9NPC8 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.52□□□□□ -1.37
SIX2Q9NPC8 AC087269.2-201ENST00000641764 975 ntBASIC6.52□□□□□ -1.37
SIX2Q9NPC8 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SIX2Q9NPC8 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.52□□□□□ -1.37
SIX2Q9NPC8 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.52□□□□□ -1.37
SIX2Q9NPC8 AC123912.3-201ENST00000600907 1367 ntBASIC6.52□□□□□ -1.37
SIX2Q9NPC8 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
SIX2Q9NPC8 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SIX2Q9NPC8 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.52□□□□□ -1.37
SIX2Q9NPC8 EIF3EP2-201ENST00000423042 1814 ntBASIC6.52□□□□□ -1.37
SIX2Q9NPC8 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
SIX2Q9NPC8 AC005224.3-201ENST00000584683 2140 ntBASIC6.52□□□□□ -1.37
SIX2Q9NPC8 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
SIX2Q9NPC8 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SIX2Q9NPC8 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.51□□□□□ -1.37
SIX2Q9NPC8 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SIX2Q9NPC8 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
SIX2Q9NPC8 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SIX2Q9NPC8 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
SIX2Q9NPC8 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.51□□□□□ -1.37
SIX2Q9NPC8 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SIX2Q9NPC8 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.51□□□□□ -1.37
SIX2Q9NPC8 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SIX2Q9NPC8 RNA5SP156-201ENST00000410250 110 ntBASIC6.51□□□□□ -1.37
SIX2Q9NPC8 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.51□□□□□ -1.37
SIX2Q9NPC8 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.51□□□□□ -1.37
SIX2Q9NPC8 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.51□□□□□ -1.37
SIX2Q9NPC8 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SIX2Q9NPC8 AC099782.1-201ENST00000425889 474 ntBASIC6.51□□□□□ -1.37
SIX2Q9NPC8 RPSAP65-201ENST00000429660 595 ntBASIC6.51□□□□□ -1.37
SIX2Q9NPC8 RPS3AP38-201ENST00000435889 763 ntBASIC6.51□□□□□ -1.37
SIX2Q9NPC8 AC023141.3-201ENST00000436698 278 ntBASIC6.51□□□□□ -1.37
SIX2Q9NPC8 KF459542.1-201ENST00000450908 553 ntBASIC6.51□□□□□ -1.37
SIX2Q9NPC8 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.51□□□□□ -1.37
SIX2Q9NPC8 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.51□□□□□ -1.37
SIX2Q9NPC8 RN7SL836P-201ENST00000476140 296 ntBASIC6.51□□□□□ -1.37
SIX2Q9NPC8 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.51□□□□□ -1.37
SIX2Q9NPC8 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.51□□□□□ -1.37
SIX2Q9NPC8 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SIX2Q9NPC8 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SIX2Q9NPC8 BTG1P1-201ENST00000540396 508 ntBASIC6.51□□□□□ -1.37
SIX2Q9NPC8 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
SIX2Q9NPC8 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SIX2Q9NPC8 BMS1P16-201ENST00000556075 1147 ntBASIC6.51□□□□□ -1.37
SIX2Q9NPC8 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.51□□□□□ -1.37
SIX2Q9NPC8 AL078601.3-201ENST00000573303 535 ntBASIC6.51□□□□□ -1.37
SIX2Q9NPC8 OR1E3-201ENST00000575608 948 ntBASIC6.51□□□□□ -1.37
SIX2Q9NPC8 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.51□□□□□ -1.37
SIX2Q9NPC8 AC005479.3-201ENST00000602790 431 ntBASIC6.51□□□□□ -1.37
SIX2Q9NPC8 RFPL4AP6-201ENST00000616792 846 ntBASIC6.51□□□□□ -1.37
SIX2Q9NPC8 AC073488.6-201ENST00000632293 754 ntBASIC6.51□□□□□ -1.37
SIX2Q9NPC8 AC079753.1-201ENST00000623243 3868 ntBASIC6.51□□□□□ -1.37
SIX2Q9NPC8 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SIX2Q9NPC8 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SIX2Q9NPC8 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
SIX2Q9NPC8 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms