Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
HIST1H1AQ02539 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 PPIAP24-201ENST00000328558 471 ntBASIC4.81□□□□□ -1.64
HIST1H1AQ02539 RNA5SP140-201ENST00000364524 92 ntBASIC4.81□□□□□ -1.64
HIST1H1AQ02539 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 MIR27A-201ENST00000385073 78 ntBASIC4.81□□□□□ -1.64
HIST1H1AQ02539 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 AC121334.1-201ENST00000396414 802 ntBASIC4.81□□□□□ -1.64
HIST1H1AQ02539 U3.43-201ENST00000410734 213 ntBASIC4.81□□□□□ -1.64
HIST1H1AQ02539 UBE2V1P14-201ENST00000415815 558 ntBASIC4.81□□□□□ -1.64
HIST1H1AQ02539 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 CYP4F30P-202ENST00000420048 405 ntBASIC4.81□□□□□ -1.64
HIST1H1AQ02539 AL589794.1-201ENST00000424971 390 ntBASIC4.81□□□□□ -1.64
HIST1H1AQ02539 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 AL845321.1-201ENST00000444603 348 ntBASIC4.81□□□□□ -1.64
HIST1H1AQ02539 AL121578.2-201ENST00000448797 447 ntBASIC4.81□□□□□ -1.64
HIST1H1AQ02539 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 CCNJP1-201ENST00000450600 1149 ntBASIC4.81□□□□□ -1.64
HIST1H1AQ02539 AC103563.5-201ENST00000455643 364 ntBASIC4.81□□□□□ -1.64
HIST1H1AQ02539 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 AL133480.2-201ENST00000456723 487 ntBASIC4.81□□□□□ -1.64
HIST1H1AQ02539 EIF3LP2-201ENST00000457262 807 ntBASIC4.81□□□□□ -1.64
HIST1H1AQ02539 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 RPS26P24-201ENST00000497656 331 ntBASIC4.81□□□□□ -1.64
HIST1H1AQ02539 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 AC020937.1-201ENST00000519677 1013 ntBASIC4.81□□□□□ -1.64
HIST1H1AQ02539 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 HNRNPA1P74-201ENST00000560782 835 ntBASIC4.81□□□□□ -1.64
HIST1H1AQ02539 OR4H6P-201ENST00000563771 921 ntBASIC4.81□□□□□ -1.64
HIST1H1AQ02539 AC092718.4-201ENST00000566639 716 ntBASIC4.81□□□□□ -1.64
HIST1H1AQ02539 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 OR7E19P-202ENST00000589942 844 ntBASIC4.81□□□□□ -1.64
HIST1H1AQ02539 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 AC245052.7-201ENST00000601161 359 ntBASIC4.81□□□□□ -1.64
HIST1H1AQ02539 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 AL512413.1-201ENST00000606489 382 ntBASIC4.81□□□□□ -1.64
HIST1H1AQ02539 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 AL137000.1-201ENST00000610528 1244 ntBASIC4.81□□□□□ -1.64
HIST1H1AQ02539 AC024255.1-201ENST00000614376 102 ntBASIC4.81□□□□□ -1.64
HIST1H1AQ02539 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 AL445649.1-201ENST00000615941 691 ntBASIC4.81□□□□□ -1.64
HIST1H1AQ02539 AC007671.1-201ENST00000616957 830 ntBASIC4.81□□□□□ -1.64
HIST1H1AQ02539 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC4.81□□□□□ -1.64
HIST1H1AQ02539 RAB28P4-201ENST00000622233 665 ntBASIC4.81□□□□□ -1.64
HIST1H1AQ02539 AC135068.11-201ENST00000636378 921 ntBASIC4.81□□□□□ -1.64
HIST1H1AQ02539 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HIST1H1AQ02539 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 SELE-204ENST00000367776 3576 ntTSL 5 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 SELE-205ENST00000367777 3576 ntTSL 5 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms