Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLDN6P56747 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.07□□□□□ -1.44
CLDN6P56747 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLDN6P56747 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLDN6P56747 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CLDN6P56747 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLDN6P56747 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.07□□□□□ -1.44
CLDN6P56747 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLDN6P56747 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.07□□□□□ -1.44
CLDN6P56747 AL022323.4-201ENST00000623980 13120 ntBASIC6.06□□□□□ -1.44
CLDN6P56747 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLDN6P56747 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLDN6P56747 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.06□□□□□ -1.44
CLDN6P56747 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLDN6P56747 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.06□□□□□ -1.44
CLDN6P56747 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.06□□□□□ -1.44
CLDN6P56747 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLDN6P56747 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CLDN6P56747 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLDN6P56747 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.06□□□□□ -1.44
CLDN6P56747 FUNDC2P3-201ENST00000334716 533 ntBASIC6.06□□□□□ -1.44
CLDN6P56747 SNORD16-201ENST00000362803 99 ntBASIC6.06□□□□□ -1.44
CLDN6P56747 RNU1-134P-201ENST00000362935 165 ntBASIC6.06□□□□□ -1.44
CLDN6P56747 RN7SKP292-201ENST00000365522 317 ntBASIC6.06□□□□□ -1.44
CLDN6P56747 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.06□□□□□ -1.44
CLDN6P56747 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CLDN6P56747 AL132875.1-201ENST00000403623 949 ntBASIC6.06□□□□□ -1.44
CLDN6P56747 MIR1178-201ENST00000408396 91 ntBASIC6.06□□□□□ -1.44
CLDN6P56747 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.06□□□□□ -1.44
CLDN6P56747 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.06□□□□□ -1.44
CLDN6P56747 PCBP2P1-201ENST00000437262 977 ntBASIC6.06□□□□□ -1.44
CLDN6P56747 DNAJC19P5-201ENST00000443295 316 ntBASIC6.06□□□□□ -1.44
CLDN6P56747 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.06□□□□□ -1.44
CLDN6P56747 HIGD1AP16-201ENST00000450986 258 ntBASIC6.06□□□□□ -1.44
CLDN6P56747 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.06□□□□□ -1.44
CLDN6P56747 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.06□□□□□ -1.44
CLDN6P56747 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.06□□□□□ -1.44
CLDN6P56747 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.06□□□□□ -1.44
CLDN6P56747 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.06□□□□□ -1.44
CLDN6P56747 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.06□□□□□ -1.44
CLDN6P56747 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.06□□□□□ -1.44
CLDN6P56747 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.06□□□□□ -1.44
CLDN6P56747 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.06□□□□□ -1.44
CLDN6P56747 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.06□□□□□ -1.44
CLDN6P56747 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.06□□□□□ -1.44
CLDN6P56747 AL513218.1-201ENST00000606527 391 ntBASIC6.06□□□□□ -1.44
CLDN6P56747 AC020658.2-201ENST00000559030 4020 ntBASIC6.06□□□□□ -1.44
CLDN6P56747 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLDN6P56747 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CLDN6P56747 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CLDN6P56747 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CLDN6P56747 CASC19-228ENST00000641414 1684 ntBASIC6.06□□□□□ -1.44
CLDN6P56747 PABPC1P8-201ENST00000452851 2086 ntBASIC6.06□□□□□ -1.44
CLDN6P56747 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.06□□□□□ -1.44
CLDN6P56747 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLDN6P56747 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.06□□□□□ -1.44
CLDN6P56747 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CLDN6P56747 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLDN6P56747 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CLDN6P56747 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLDN6P56747 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
CLDN6P56747 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.06□□□□□ -1.44
CLDN6P56747 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLDN6P56747 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.05□□□□□ -1.44
CLDN6P56747 AL136531.3-201ENST00000624378 3658 ntBASIC6.05□□□□□ -1.44
CLDN6P56747 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLDN6P56747 SHQ1P1-201ENST00000437111 1544 ntBASIC6.05□□□□□ -1.44
CLDN6P56747 AC010329.1-201ENST00000593903 8328 ntBASIC6.05□□□□□ -1.44
CLDN6P56747 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CLDN6P56747 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CLDN6P56747 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CLDN6P56747 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLDN6P56747 AC110716.2-201ENST00000563865 3945 ntBASIC6.05□□□□□ -1.44
CLDN6P56747 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.05□□□□□ -1.44
CLDN6P56747 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLDN6P56747 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLDN6P56747 MIR541-201ENST00000401360 84 ntBASIC6.05□□□□□ -1.44
CLDN6P56747 RN7SKP121-201ENST00000410842 305 ntBASIC6.05□□□□□ -1.44
CLDN6P56747 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.05□□□□□ -1.44
CLDN6P56747 Z68868.1-201ENST00000429048 544 ntBASIC6.05□□□□□ -1.44
CLDN6P56747 NDUFS5P5-201ENST00000437256 321 ntBASIC6.05□□□□□ -1.44
CLDN6P56747 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.05□□□□□ -1.44
CLDN6P56747 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.05□□□□□ -1.44
CLDN6P56747 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.05□□□□□ -1.44
CLDN6P56747 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.05□□□□□ -1.44
CLDN6P56747 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.05□□□□□ -1.44
CLDN6P56747 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.05□□□□□ -1.44
CLDN6P56747 AC011476.1-201ENST00000466725 307 ntBASIC6.05□□□□□ -1.44
CLDN6P56747 MTND6P8-201ENST00000503471 522 ntBASIC6.05□□□□□ -1.44
CLDN6P56747 CR383658.1-201ENST00000514609 734 ntBASIC6.05□□□□□ -1.44
CLDN6P56747 RNA5SP362-201ENST00000516048 118 ntBASIC6.05□□□□□ -1.44
CLDN6P56747 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.05□□□□□ -1.44
CLDN6P56747 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.05□□□□□ -1.44
CLDN6P56747 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.05□□□□□ -1.44
CLDN6P56747 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.05□□□□□ -1.44
CLDN6P56747 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.05□□□□□ -1.44
CLDN6P56747 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.05□□□□□ -1.44
CLDN6P56747 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.05□□□□□ -1.44
CLDN6P56747 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.05□□□□□ -1.44
CLDN6P56747 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms