Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC105233.3-201ENST00000531125 744 ntBASIC8.01□□□□□ -1.13
LIG1P18858 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC8.01□□□□□ -1.13
LIG1P18858 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC8.01□□□□□ -1.13
LIG1P18858 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
LIG1P18858 AL356801.1-201ENST00000559320 294 ntBASIC8.01□□□□□ -1.13
LIG1P18858 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC8.01□□□□□ -1.13
LIG1P18858 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC8.01□□□□□ -1.13
LIG1P18858 SNORA70D-201ENST00000578836 135 ntBASIC8.01□□□□□ -1.13
LIG1P18858 AC015818.6-201ENST00000584274 634 ntBASIC8.01□□□□□ -1.13
LIG1P18858 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC8.01□□□□□ -1.13
LIG1P18858 RPSAP66-201ENST00000592196 606 ntBASIC8.01□□□□□ -1.13
LIG1P18858 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC8.01□□□□□ -1.13
LIG1P18858 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC8.01□□□□□ -1.13
LIG1P18858 AC139493.1-201ENST00000604368 397 ntBASIC8.01□□□□□ -1.13
LIG1P18858 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC8.01□□□□□ -1.13
LIG1P18858 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC8.01□□□□□ -1.13
LIG1P18858 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC8.01□□□□□ -1.13
LIG1P18858 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC8.01□□□□□ -1.13
LIG1P18858 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
LIG1P18858 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
LIG1P18858 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC8.01□□□□□ -1.13
LIG1P18858 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
LIG1P18858 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
LIG1P18858 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
LIG1P18858 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
LIG1P18858 PABPC1P8-201ENST00000452851 2086 ntBASIC8.01□□□□□ -1.13
LIG1P18858 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
LIG1P18858 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
LIG1P18858 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
LIG1P18858 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
LIG1P18858 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
LIG1P18858 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC8□□□□□ -1.13
LIG1P18858 AP000866.6-201ENST00000638898 3579 ntBASIC8□□□□□ -1.13
LIG1P18858 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC8□□□□□ -1.13
LIG1P18858 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC8□□□□□ -1.13
LIG1P18858 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC8□□□□□ -1.13
LIG1P18858 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
LIG1P18858 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC8□□□□□ -1.13
LIG1P18858 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC8□□□□□ -1.13
LIG1P18858 AC023886.2-201ENST00000321285 411 ntBASIC8□□□□□ -1.13
LIG1P18858 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
LIG1P18858 RNU4-81P-201ENST00000363561 144 ntBASIC8□□□□□ -1.13
LIG1P18858 RN7SKP257-201ENST00000364525 309 ntBASIC8□□□□□ -1.13
LIG1P18858 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC8□□□□□ -1.13
LIG1P18858 AC090114.1-201ENST00000393266 448 ntBASIC8□□□□□ -1.13
LIG1P18858 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC8□□□□□ -1.13
LIG1P18858 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC8□□□□□ -1.13
LIG1P18858 NIFKP3-201ENST00000417799 865 ntBASIC8□□□□□ -1.13
LIG1P18858 AL359633.1-201ENST00000421403 310 ntBASIC8□□□□□ -1.13
LIG1P18858 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC8□□□□□ -1.13
LIG1P18858 MTCYBP29-201ENST00000436327 1006 ntBASIC8□□□□□ -1.13
LIG1P18858 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC8□□□□□ -1.13
LIG1P18858 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC8□□□□□ -1.13
LIG1P18858 OR10R1P-201ENST00000441524 1141 ntBASIC8□□□□□ -1.13
LIG1P18858 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC8□□□□□ -1.13
LIG1P18858 AC092155.2-201ENST00000454675 477 ntBASIC8□□□□□ -1.13
LIG1P18858 RN7SL776P-201ENST00000493390 268 ntBASIC8□□□□□ -1.13
LIG1P18858 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC8□□□□□ -1.13
LIG1P18858 AC112518.2-201ENST00000508565 425 ntBASIC8□□□□□ -1.13
LIG1P18858 AC096754.1-201ENST00000508904 818 ntBASIC8□□□□□ -1.13
LIG1P18858 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC8□□□□□ -1.13
LIG1P18858 HMGN1P17-201ENST00000513734 295 ntBASIC8□□□□□ -1.13
LIG1P18858 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC8□□□□□ -1.13
LIG1P18858 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC8□□□□□ -1.13
LIG1P18858 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC8□□□□□ -1.13
LIG1P18858 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC8□□□□□ -1.13
LIG1P18858 EEF1B2P1-201ENST00000567221 672 ntBASIC8□□□□□ -1.13
LIG1P18858 AC016839.1-201ENST00000578162 867 ntBASIC8□□□□□ -1.13
LIG1P18858 AC087575.1-201ENST00000585087 229 ntBASIC8□□□□□ -1.13
LIG1P18858 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC8□□□□□ -1.13
LIG1P18858 AL139407.1-201ENST00000613826 1175 ntBASIC8□□□□□ -1.13
LIG1P18858 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC8□□□□□ -1.13
LIG1P18858 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC8□□□□□ -1.13
LIG1P18858 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC8□□□□□ -1.13
LIG1P18858 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
LIG1P18858 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
LIG1P18858 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
LIG1P18858 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC8□□□□□ -1.13
LIG1P18858 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC8□□□□□ -1.13
LIG1P18858 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC8□□□□□ -1.13
LIG1P18858 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC8□□□□□ -1.13
LIG1P18858 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
LIG1P18858 AC122713.2-201ENST00000624942 3335 ntBASIC8□□□□□ -1.13
LIG1P18858 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LIG1P18858 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.99□□□□□ -1.13
LIG1P18858 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.99□□□□□ -1.13
LIG1P18858 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LIG1P18858 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LIG1P18858 AL136531.3-201ENST00000624378 3658 ntBASIC7.99□□□□□ -1.13
LIG1P18858 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LIG1P18858 MTND4P34-201ENST00000572715 1371 ntBASIC7.99□□□□□ -1.13
LIG1P18858 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.99□□□□□ -1.13
LIG1P18858 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.99□□□□□ -1.13
LIG1P18858 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC7.99□□□□□ -1.13
LIG1P18858 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
LIG1P18858 RN7SKP254-201ENST00000410685 310 ntBASIC7.99□□□□□ -1.13
LIG1P18858 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC7.99□□□□□ -1.13
LIG1P18858 SEPT2P1-201ENST00000419651 180 ntBASIC7.99□□□□□ -1.13
LIG1P18858 HCG25-217ENST00000422366 702 ntTSL 3 BASIC7.99□□□□□ -1.13
LIG1P18858 UQCRHP1-204ENST00000424609 274 ntBASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms