Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PKHD1P08F94 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PKHD1P08F94 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PKHD1P08F94 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC3.7□□□□□ -1.82
PKHD1P08F94 ATP11A-212ENST00000487903 8858 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
PKHD1P08F94 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
PKHD1P08F94 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
PKHD1P08F94 AL121768.1-201ENST00000613917 2544 ntBASIC3.7□□□□□ -1.82
PKHD1P08F94 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PKHD1P08F94 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC3.7□□□□□ -1.82
PKHD1P08F94 AL133325.1-201ENST00000421090 382 ntBASIC3.7□□□□□ -1.82
PKHD1P08F94 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC3.7□□□□□ -1.82
PKHD1P08F94 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC3.7□□□□□ -1.82
PKHD1P08F94 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC3.7□□□□□ -1.82
PKHD1P08F94 RPL7P11-201ENST00000437586 658 ntBASIC3.7□□□□□ -1.82
PKHD1P08F94 RPS23P9-201ENST00000448848 438 ntBASIC3.7□□□□□ -1.82
PKHD1P08F94 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.7□□□□□ -1.82
PKHD1P08F94 RPS27AP3-201ENST00000453803 454 ntBASIC3.7□□□□□ -1.82
PKHD1P08F94 RN7SL570P-201ENST00000484405 292 ntBASIC3.7□□□□□ -1.82
PKHD1P08F94 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC3.7□□□□□ -1.82
PKHD1P08F94 AC109583.2-201ENST00000617367 129 ntBASIC3.7□□□□□ -1.82
PKHD1P08F94 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
PKHD1P08F94 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PKHD1P08F94 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC3.7□□□□□ -1.82
PKHD1P08F94 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC3.7□□□□□ -1.82
PKHD1P08F94 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PKHD1P08F94 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
PKHD1P08F94 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC3.7□□□□□ -1.82
PKHD1P08F94 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC3.7□□□□□ -1.82
PKHD1P08F94 AL353625.1-202ENST00000366273 571 ntBASIC3.7□□□□□ -1.82
PKHD1P08F94 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC3.7□□□□□ -1.82
PKHD1P08F94 COX6B1P1-201ENST00000415962 213 ntBASIC3.7□□□□□ -1.82
PKHD1P08F94 AC104837.2-201ENST00000427236 424 ntBASIC3.7□□□□□ -1.82
PKHD1P08F94 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.7□□□□□ -1.82
PKHD1P08F94 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC3.7□□□□□ -1.82
PKHD1P08F94 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.7□□□□□ -1.82
PKHD1P08F94 AC011840.5-201ENST00000582125 771 ntBASIC3.7□□□□□ -1.82
PKHD1P08F94 RPL27-207ENST00000590864 569 ntTSL 2 BASIC3.7□□□□□ -1.82
PKHD1P08F94 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC3.7□□□□□ -1.82
PKHD1P08F94 AP000866.6-201ENST00000638898 3579 ntBASIC3.7□□□□□ -1.82
PKHD1P08F94 AF131215.2-201ENST00000531549 1710 ntBASIC3.7□□□□□ -1.82
PKHD1P08F94 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC3.7□□□□□ -1.82
PKHD1P08F94 DIP2C-201ENST00000280886 7888 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PKHD1P08F94 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC3.7□□□□□ -1.82
PKHD1P08F94 LRRC37BP1-203ENST00000417404 4742 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PKHD1P08F94 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC3.7□□□□□ -1.82
PKHD1P08F94 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PKHD1P08F94 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
PKHD1P08F94 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PKHD1P08F94 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
PKHD1P08F94 RNA5SP505-201ENST00000364748 108 ntBASIC3.7□□□□□ -1.82
PKHD1P08F94 SNORA16A-201ENST00000384342 137 ntBASIC3.7□□□□□ -1.82
PKHD1P08F94 MIR199B-201ENST00000384849 110 ntBASIC3.7□□□□□ -1.82
PKHD1P08F94 AC073648.4-201ENST00000442655 781 ntBASIC3.7□□□□□ -1.82
PKHD1P08F94 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC3.7□□□□□ -1.82
PKHD1P08F94 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC3.7□□□□□ -1.82
PKHD1P08F94 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.7□□□□□ -1.82
PKHD1P08F94 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC3.7□□□□□ -1.82
PKHD1P08F94 RAB9BP1-201ENST00000519581 626 ntBASIC3.7□□□□□ -1.82
PKHD1P08F94 AC127381.1-201ENST00000555979 939 ntBASIC3.7□□□□□ -1.82
PKHD1P08F94 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC3.7□□□□□ -1.82
PKHD1P08F94 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PKHD1P08F94 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC3.7□□□□□ -1.82
PKHD1P08F94 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC3.7□□□□□ -1.82
PKHD1P08F94 CYP4F35P-202ENST00000636121 390 ntBASIC3.7□□□□□ -1.82
PKHD1P08F94 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PKHD1P08F94 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
PKHD1P08F94 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
PKHD1P08F94 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PKHD1P08F94 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PKHD1P08F94 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PKHD1P08F94 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PKHD1P08F94 KIAA1671-201ENST00000358431 10490 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PKHD1P08F94 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC3.69□□□□□ -1.82
PKHD1P08F94 PLEKHA3-201ENST00000234453 13880 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PKHD1P08F94 AC112243.1-201ENST00000623949 3851 ntBASIC3.69□□□□□ -1.82
PKHD1P08F94 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PKHD1P08F94 AC068138.1-201ENST00000412635 217 ntBASIC3.69□□□□□ -1.82
PKHD1P08F94 DUTP4-201ENST00000424782 475 ntBASIC3.69□□□□□ -1.82
PKHD1P08F94 AC126120.1-201ENST00000431082 470 ntBASIC3.69□□□□□ -1.82
PKHD1P08F94 AC093824.1-201ENST00000508796 343 ntBASIC3.69□□□□□ -1.82
PKHD1P08F94 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.69□□□□□ -1.82
PKHD1P08F94 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC3.69□□□□□ -1.82
PKHD1P08F94 AC092375.1-201ENST00000550410 637 ntBASIC3.69□□□□□ -1.82
PKHD1P08F94 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.69□□□□□ -1.82
PKHD1P08F94 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC3.69□□□□□ -1.82
PKHD1P08F94 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PKHD1P08F94 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.69□□□□□ -1.82
PKHD1P08F94 AL353662.3-201ENST00000625131 237 ntBASIC3.69□□□□□ -1.82
PKHD1P08F94 AC073869.10-201ENST00000642016 354 ntBASIC3.69□□□□□ -1.82
PKHD1P08F94 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC3.69□□□□□ -1.82
PKHD1P08F94 NRAP-203ENST00000369358 5534 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PKHD1P08F94 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PKHD1P08F94 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC3.69□□□□□ -1.82
PKHD1P08F94 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC3.69□□□□□ -1.82
PKHD1P08F94 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC3.69□□□□□ -1.82
PKHD1P08F94 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
PKHD1P08F94 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PKHD1P08F94 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC3.69□□□□□ -1.82
PKHD1P08F94 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms