Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC245096.1-201ENST00000413104 546 ntBASIC6.06□□□□□ -1.44
TNFP01375 AC066692.1-201ENST00000421721 457 ntBASIC6.06□□□□□ -1.44
TNFP01375 TRIM60P16-201ENST00000444048 694 ntBASIC6.06□□□□□ -1.44
TNFP01375 CFL1P4-201ENST00000451536 498 ntBASIC6.06□□□□□ -1.44
TNFP01375 RNA5SP434-201ENST00000516647 121 ntBASIC6.06□□□□□ -1.44
TNFP01375 RNA5SP340-201ENST00000517132 107 ntBASIC6.06□□□□□ -1.44
TNFP01375 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.06□□□□□ -1.44
TNFP01375 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.06□□□□□ -1.44
TNFP01375 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.06□□□□□ -1.44
TNFP01375 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.06□□□□□ -1.44
TNFP01375 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TNFP01375 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
TNFP01375 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.06□□□□□ -1.44
TNFP01375 AL355480.1-201ENST00000629041 99 ntBASIC6.06□□□□□ -1.44
TNFP01375 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.06□□□□□ -1.44
TNFP01375 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TNFP01375 AL022323.4-201ENST00000623980 13120 ntBASIC6.06□□□□□ -1.44
TNFP01375 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.06□□□□□ -1.44
TNFP01375 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
TNFP01375 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.06□□□□□ -1.44
TNFP01375 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TNFP01375 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TNFP01375 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
TNFP01375 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TNFP01375 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TNFP01375 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TNFP01375 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.06□□□□□ -1.44
TNFP01375 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TNFP01375 RBMY1HP-201ENST00000382759 1389 ntBASIC6.06□□□□□ -1.44
TNFP01375 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
TNFP01375 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.05□□□□□ -1.44
TNFP01375 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TNFP01375 MAPK10-365ENST00000641902 3825 ntBASIC6.05□□□□□ -1.44
TNFP01375 BIN2P1-201ENST00000504996 1530 ntBASIC6.05□□□□□ -1.44
TNFP01375 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.05□□□□□ -1.44
TNFP01375 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
TNFP01375 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
TNFP01375 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.05□□□□□ -1.44
TNFP01375 SUGT1P2-201ENST00000379452 992 ntBASIC6.05□□□□□ -1.44
TNFP01375 RNU11-6P-201ENST00000391127 133 ntBASIC6.05□□□□□ -1.44
TNFP01375 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
TNFP01375 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.05□□□□□ -1.44
TNFP01375 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.05□□□□□ -1.44
TNFP01375 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.05□□□□□ -1.44
TNFP01375 IPPKP1-201ENST00000422501 768 ntBASIC6.05□□□□□ -1.44
TNFP01375 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.05□□□□□ -1.44
TNFP01375 RPL12P12-201ENST00000424633 501 ntBASIC6.05□□□□□ -1.44
TNFP01375 OR13K1P-201ENST00000444577 975 ntBASIC6.05□□□□□ -1.44
TNFP01375 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.05□□□□□ -1.44
TNFP01375 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.05□□□□□ -1.44
TNFP01375 ACA64.1-201ENST00000459171 127 ntBASIC6.05□□□□□ -1.44
TNFP01375 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TNFP01375 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.05□□□□□ -1.44
TNFP01375 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TNFP01375 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.05□□□□□ -1.44
TNFP01375 AP004607.6-201ENST00000525033 1202 ntBASIC6.05□□□□□ -1.44
TNFP01375 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.05□□□□□ -1.44
TNFP01375 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
TNFP01375 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.05□□□□□ -1.44
TNFP01375 NANOGNBP2-201ENST00000544753 553 ntBASIC6.05□□□□□ -1.44
TNFP01375 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.05□□□□□ -1.44
TNFP01375 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.05□□□□□ -1.44
TNFP01375 LINC00556-201ENST00000569603 412 ntBASIC6.05□□□□□ -1.44
TNFP01375 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.05□□□□□ -1.44
TNFP01375 AC090236.2-201ENST00000587933 1101 ntBASIC6.05□□□□□ -1.44
TNFP01375 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.05□□□□□ -1.44
TNFP01375 AC008555.7-201ENST00000605008 583 ntBASIC6.05□□□□□ -1.44
TNFP01375 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
TNFP01375 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TNFP01375 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.05□□□□□ -1.44
TNFP01375 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
TNFP01375 AC008627.1-201ENST00000517511 1704 ntBASIC6.05□□□□□ -1.44
TNFP01375 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TNFP01375 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TNFP01375 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
TNFP01375 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TNFP01375 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TNFP01375 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TNFP01375 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
TNFP01375 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TNFP01375 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
TNFP01375 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.04□□□□□ -1.44
TNFP01375 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.04□□□□□ -1.44
TNFP01375 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TNFP01375 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.04□□□□□ -1.44
TNFP01375 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.04□□□□□ -1.44
TNFP01375 FTLP8-201ENST00000446770 267 ntBASIC6.04□□□□□ -1.44
TNFP01375 AC005077.1-201ENST00000449226 375 ntBASIC6.04□□□□□ -1.44
TNFP01375 AL359839.1-201ENST00000451975 1160 ntBASIC6.04□□□□□ -1.44
TNFP01375 AC092865.4-201ENST00000477936 615 ntBASIC6.04□□□□□ -1.44
TNFP01375 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.04□□□□□ -1.44
TNFP01375 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.04□□□□□ -1.44
TNFP01375 OR5H7P-201ENST00000514084 930 ntBASIC6.04□□□□□ -1.44
TNFP01375 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.04□□□□□ -1.44
TNFP01375 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.04□□□□□ -1.44
TNFP01375 RPA2P3-201ENST00000533268 770 ntBASIC6.04□□□□□ -1.44
TNFP01375 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.04□□□□□ -1.44
TNFP01375 NPIPB1P-202ENST00000588786 828 ntBASIC6.04□□□□□ -1.44
TNFP01375 AL645933.2-201ENST00000606743 1207 ntBASIC6.04□□□□□ -1.44
TNFP01375 AL445649.1-201ENST00000615941 691 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms