Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC024940.4-201ENST00000605507 246 ntBASIC6.41□□□□□ -1.38
PDGFBP01127 MIR6809-201ENST00000612189 116 ntBASIC6.41□□□□□ -1.38
PDGFBP01127 MIR6793-201ENST00000612376 63 ntBASIC6.41□□□□□ -1.38
PDGFBP01127 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.41□□□□□ -1.38
PDGFBP01127 AL354718.1-201ENST00000619764 589 ntBASIC6.41□□□□□ -1.38
PDGFBP01127 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.41□□□□□ -1.38
PDGFBP01127 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PDGFBP01127 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
PDGFBP01127 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC6.41□□□□□ -1.38
PDGFBP01127 SALL4P7-201ENST00000555779 3120 ntBASIC6.41□□□□□ -1.38
PDGFBP01127 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PDGFBP01127 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.41□□□□□ -1.38
PDGFBP01127 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.41□□□□□ -1.38
PDGFBP01127 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PDGFBP01127 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
PDGFBP01127 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PDGFBP01127 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PDGFBP01127 OR13C1P-202ENST00000641378 2919 ntBASIC6.41□□□□□ -1.38
PDGFBP01127 NEPNP-201ENST00000404786 1371 ntBASIC6.41□□□□□ -1.38
PDGFBP01127 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
PDGFBP01127 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.41□□□□□ -1.38
PDGFBP01127 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PDGFBP01127 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
PDGFBP01127 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.4□□□□□ -1.38
PDGFBP01127 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PDGFBP01127 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
PDGFBP01127 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PDGFBP01127 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PDGFBP01127 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PDGFBP01127 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PDGFBP01127 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.4□□□□□ -1.38
PDGFBP01127 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.4□□□□□ -1.38
PDGFBP01127 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
PDGFBP01127 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.4□□□□□ -1.38
PDGFBP01127 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PDGFBP01127 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.4□□□□□ -1.38
PDGFBP01127 NPM1P38-201ENST00000403835 865 ntBASIC6.4□□□□□ -1.38
PDGFBP01127 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.4□□□□□ -1.38
PDGFBP01127 DUTP7-201ENST00000507982 486 ntBASIC6.4□□□□□ -1.38
PDGFBP01127 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.4□□□□□ -1.38
PDGFBP01127 SCARNA18.1-201ENST00000516330 83 ntBASIC6.4□□□□□ -1.38
PDGFBP01127 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.4□□□□□ -1.38
PDGFBP01127 OR5D2P-201ENST00000524390 911 ntBASIC6.4□□□□□ -1.38
PDGFBP01127 AC010547.6-201ENST00000571789 193 ntBASIC6.4□□□□□ -1.38
PDGFBP01127 AC104695.2-201ENST00000605056 775 ntBASIC6.4□□□□□ -1.38
PDGFBP01127 MRPL57P1-201ENST00000621486 265 ntBASIC6.4□□□□□ -1.38
PDGFBP01127 AC130448.2-201ENST00000624082 374 ntBASIC6.4□□□□□ -1.38
PDGFBP01127 AC116667.2-201ENST00000641075 823 ntBASIC6.4□□□□□ -1.38
PDGFBP01127 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.38
PDGFBP01127 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PDGFBP01127 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PDGFBP01127 AC235565.1-201ENST00000456962 1325 ntBASIC6.4□□□□□ -1.39
PDGFBP01127 CR383656.5-201ENST00000547616 1340 ntBASIC6.4□□□□□ -1.39
PDGFBP01127 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.4□□□□□ -1.39
PDGFBP01127 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PDGFBP01127 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PDGFBP01127 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.4□□□□□ -1.39
PDGFBP01127 AC125238.2-201ENST00000430003 1440 ntBASIC6.4□□□□□ -1.39
PDGFBP01127 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PDGFBP01127 AC120036.2-201ENST00000509729 1474 ntBASIC6.4□□□□□ -1.39
PDGFBP01127 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.4□□□□□ -1.39
PDGFBP01127 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
PDGFBP01127 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
PDGFBP01127 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PDGFBP01127 AC104837.1-201ENST00000444644 1587 ntBASIC6.4□□□□□ -1.39
PDGFBP01127 UGT2B25P-201ENST00000511504 1586 ntBASIC6.4□□□□□ -1.39
PDGFBP01127 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.4□□□□□ -1.39
PDGFBP01127 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFBP01127 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.39□□□□□ -1.39
PDGFBP01127 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
PDGFBP01127 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFBP01127 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.39□□□□□ -1.39
PDGFBP01127 AC104162.1-201ENST00000430831 2382 ntBASIC6.39□□□□□ -1.39
PDGFBP01127 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.39□□□□□ -1.39
PDGFBP01127 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
PDGFBP01127 AC073342.2-201ENST00000595842 1800 ntBASIC6.39□□□□□ -1.39
PDGFBP01127 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
PDGFBP01127 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PDGFBP01127 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFBP01127 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFBP01127 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFBP01127 MTHFD2P5-201ENST00000320415 844 ntBASIC6.39□□□□□ -1.39
PDGFBP01127 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.39□□□□□ -1.39
PDGFBP01127 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.39□□□□□ -1.39
PDGFBP01127 AC245452.2-201ENST00000435222 392 ntBASIC6.39□□□□□ -1.39
PDGFBP01127 VN1R110P-201ENST00000438988 971 ntBASIC6.39□□□□□ -1.39
PDGFBP01127 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.39□□□□□ -1.39
PDGFBP01127 OTX2P1-201ENST00000450956 354 ntBASIC6.39□□□□□ -1.39
PDGFBP01127 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFBP01127 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.39□□□□□ -1.39
PDGFBP01127 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFBP01127 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC6.39□□□□□ -1.39
PDGFBP01127 BUB1P1-201ENST00000603541 607 ntBASIC6.39□□□□□ -1.39
PDGFBP01127 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.39□□□□□ -1.39
PDGFBP01127 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.39□□□□□ -1.39
PDGFBP01127 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
PDGFBP01127 RBMY1HP-201ENST00000382759 1389 ntBASIC6.39□□□□□ -1.39
PDGFBP01127 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFBP01127 AC005261.2-201ENST00000593427 4258 ntBASIC6.39□□□□□ -1.39
PDGFBP01127 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms