Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 AL445238.1-204ENST00000400311 463 ntBASIC6.47□□□□□ -1.37
PCDH9Q9HC56 AL121835.1-201ENST00000404250 354 ntBASIC6.47□□□□□ -1.37
PCDH9Q9HC56 RN7SKP151-201ENST00000410230 316 ntBASIC6.47□□□□□ -1.37
PCDH9Q9HC56 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 AL360013.1-201ENST00000419031 858 ntBASIC6.47□□□□□ -1.37
PCDH9Q9HC56 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 KATNBL1P2-201ENST00000433311 835 ntBASIC6.47□□□□□ -1.37
PCDH9Q9HC56 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 KF459542.1-201ENST00000450908 553 ntBASIC6.47□□□□□ -1.37
PCDH9Q9HC56 RN7SL39P-201ENST00000462264 297 ntBASIC6.47□□□□□ -1.37
PCDH9Q9HC56 RPS7P10-201ENST00000464254 603 ntBASIC6.47□□□□□ -1.37
PCDH9Q9HC56 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 AL035690.1-201ENST00000490892 383 ntBASIC6.47□□□□□ -1.37
PCDH9Q9HC56 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 RNA5SP418-201ENST00000515951 117 ntBASIC6.47□□□□□ -1.37
PCDH9Q9HC56 AC135983.3-201ENST00000528049 1226 ntBASIC6.47□□□□□ -1.37
PCDH9Q9HC56 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 AL589765.6-201ENST00000601909 549 ntBASIC6.47□□□□□ -1.37
PCDH9Q9HC56 AC006924.1-201ENST00000610750 559 ntBASIC6.47□□□□□ -1.37
PCDH9Q9HC56 AC097641.3-201ENST00000613523 464 ntBASIC6.47□□□□□ -1.37
PCDH9Q9HC56 AC015819.1-201ENST00000613588 663 ntBASIC6.47□□□□□ -1.37
PCDH9Q9HC56 AC089999.3-201ENST00000622440 577 ntBASIC6.47□□□□□ -1.37
PCDH9Q9HC56 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 AL136984.1-201ENST00000607611 1893 ntBASIC6.47□□□□□ -1.37
PCDH9Q9HC56 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PCDH9Q9HC56 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PCDH9Q9HC56 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.46□□□□□ -1.37
PCDH9Q9HC56 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
PCDH9Q9HC56 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.46□□□□□ -1.37
PCDH9Q9HC56 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
PCDH9Q9HC56 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PCDH9Q9HC56 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
PCDH9Q9HC56 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PCDH9Q9HC56 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PCDH9Q9HC56 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.46□□□□□ -1.38
PCDH9Q9HC56 MIR191-201ENST00000384873 92 ntBASIC6.46□□□□□ -1.38
PCDH9Q9HC56 RPL23AP17-201ENST00000401064 499 ntBASIC6.46□□□□□ -1.38
PCDH9Q9HC56 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.46□□□□□ -1.38
PCDH9Q9HC56 RN7SKP38-201ENST00000410782 309 ntBASIC6.46□□□□□ -1.38
PCDH9Q9HC56 RPS26P38-201ENST00000414476 348 ntBASIC6.46□□□□□ -1.38
PCDH9Q9HC56 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.46□□□□□ -1.38
PCDH9Q9HC56 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.46□□□□□ -1.38
PCDH9Q9HC56 AC016027.5-201ENST00000427227 210 ntBASIC6.46□□□□□ -1.38
PCDH9Q9HC56 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.46□□□□□ -1.38
PCDH9Q9HC56 COX4I1P2-201ENST00000447446 547 ntBASIC6.46□□□□□ -1.38
PCDH9Q9HC56 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.46□□□□□ -1.38
PCDH9Q9HC56 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.46□□□□□ -1.38
PCDH9Q9HC56 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PCDH9Q9HC56 RN7SL714P-201ENST00000487050 298 ntBASIC6.46□□□□□ -1.38
PCDH9Q9HC56 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.46□□□□□ -1.38
PCDH9Q9HC56 AC010343.2-201ENST00000510162 224 ntBASIC6.46□□□□□ -1.38
PCDH9Q9HC56 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.46□□□□□ -1.38
PCDH9Q9HC56 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.46□□□□□ -1.38
PCDH9Q9HC56 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC6.46□□□□□ -1.38
PCDH9Q9HC56 AC008429.4-201ENST00000521201 182 ntBASIC6.46□□□□□ -1.38
PCDH9Q9HC56 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PCDH9Q9HC56 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.46□□□□□ -1.38
PCDH9Q9HC56 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.46□□□□□ -1.38
PCDH9Q9HC56 MEG8-217ENST00000556637 924 ntTSL 5 BASIC6.46□□□□□ -1.38
PCDH9Q9HC56 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.46□□□□□ -1.38
PCDH9Q9HC56 AC005725.1-201ENST00000577346 2607 ntBASIC6.46□□□□□ -1.38
PCDH9Q9HC56 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.46□□□□□ -1.38
PCDH9Q9HC56 WBP1LP11-201ENST00000586141 328 ntBASIC6.46□□□□□ -1.38
PCDH9Q9HC56 AC026898.1-201ENST00000586404 571 ntBASIC6.46□□□□□ -1.38
PCDH9Q9HC56 NPIPB1P-202ENST00000588786 828 ntBASIC6.46□□□□□ -1.38
PCDH9Q9HC56 AC063977.7-201ENST00000594454 337 ntBASIC6.46□□□□□ -1.38
PCDH9Q9HC56 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.46□□□□□ -1.38
PCDH9Q9HC56 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC6.46□□□□□ -1.38
PCDH9Q9HC56 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.46□□□□□ -1.38
PCDH9Q9HC56 AC018690.1-201ENST00000608144 626 ntBASIC6.46□□□□□ -1.38
PCDH9Q9HC56 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.46□□□□□ -1.38
PCDH9Q9HC56 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PCDH9Q9HC56 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.46□□□□□ -1.38
PCDH9Q9HC56 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PCDH9Q9HC56 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.38
PCDH9Q9HC56 AP001541.1-201ENST00000623322 1904 ntBASIC6.46□□□□□ -1.38
PCDH9Q9HC56 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PCDH9Q9HC56 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms