Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC114546.4-201ENST00000624413 369 ntBASIC5.62□□□□□ -1.51
RFT1Q96AA3 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.62□□□□□ -1.51
RFT1Q96AA3 AC027559.1-201ENST00000636288 271 ntBASIC5.62□□□□□ -1.51
RFT1Q96AA3 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFT1Q96AA3 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFT1Q96AA3 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFT1Q96AA3 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.62□□□□□ -1.51
RFT1Q96AA3 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFT1Q96AA3 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
RFT1Q96AA3 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFT1Q96AA3 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFT1Q96AA3 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RFT1Q96AA3 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFT1Q96AA3 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFT1Q96AA3 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 AL080312.1-201ENST00000256654 824 ntBASIC5.61□□□□□ -1.51
RFT1Q96AA3 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFT1Q96AA3 RN7SKP130-201ENST00000364924 301 ntBASIC5.61□□□□□ -1.51
RFT1Q96AA3 RNA5SP152-201ENST00000365184 110 ntBASIC5.61□□□□□ -1.51
RFT1Q96AA3 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RFT1Q96AA3 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 RNA5SP35-201ENST00000391257 129 ntBASIC5.61□□□□□ -1.51
RFT1Q96AA3 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFT1Q96AA3 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 PPIAP23-201ENST00000420099 497 ntBASIC5.61□□□□□ -1.51
RFT1Q96AA3 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RFT1Q96AA3 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RFT1Q96AA3 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RFT1Q96AA3 DLD-205ENST00000440410 1993 ntTSL 2 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 RPL7L1P3-201ENST00000455249 689 ntBASIC5.61□□□□□ -1.51
RFT1Q96AA3 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RFT1Q96AA3 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 UOX-201ENST00000471089 899 ntBASIC5.61□□□□□ -1.51
RFT1Q96AA3 HMGB3P14-201ENST00000494195 599 ntBASIC5.61□□□□□ -1.51
RFT1Q96AA3 AL390198.2-201ENST00000510553 222 ntBASIC5.61□□□□□ -1.51
RFT1Q96AA3 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 OR52H2P-201ENST00000514607 902 ntBASIC5.61□□□□□ -1.51
RFT1Q96AA3 SETP21-201ENST00000514799 892 ntBASIC5.61□□□□□ -1.51
RFT1Q96AA3 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 AP005902.2-201ENST00000518393 307 ntBASIC5.61□□□□□ -1.51
RFT1Q96AA3 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 AC022784.5-201ENST00000522241 437 ntBASIC5.61□□□□□ -1.51
RFT1Q96AA3 AC008429.2-201ENST00000523057 864 ntBASIC5.61□□□□□ -1.51
RFT1Q96AA3 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFT1Q96AA3 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RFT1Q96AA3 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 ANP32BP1-202ENST00000568553 737 ntBASIC5.61□□□□□ -1.51
RFT1Q96AA3 AC091932.1-201ENST00000569381 427 ntBASIC5.61□□□□□ -1.51
RFT1Q96AA3 AC133552.1-201ENST00000569988 4007 ntBASIC5.61□□□□□ -1.51
RFT1Q96AA3 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFT1Q96AA3 AL049829.3-202ENST00000604278 711 ntBASIC5.61□□□□□ -1.51
RFT1Q96AA3 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 LINC02019-201ENST00000608605 2060 ntBASIC5.61□□□□□ -1.51
RFT1Q96AA3 ZNF710-AS1-202ENST00000620791 2133 ntBASIC5.61□□□□□ -1.51
RFT1Q96AA3 AC061999.1-201ENST00000624454 177 ntBASIC5.61□□□□□ -1.51
RFT1Q96AA3 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFT1Q96AA3 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.61□□□□□ -1.51
RFT1Q96AA3 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RFT1Q96AA3 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RFT1Q96AA3 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFT1Q96AA3 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RFT1Q96AA3 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RFT1Q96AA3 THAP12P8-201ENST00000447914 2115 ntBASIC5.6□□□□□ -1.51
RFT1Q96AA3 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RFT1Q96AA3 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
RFT1Q96AA3 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
RFT1Q96AA3 AC097063.1-201ENST00000426714 1797 ntBASIC5.6□□□□□ -1.51
RFT1Q96AA3 BIN2P1-201ENST00000504996 1530 ntBASIC5.6□□□□□ -1.51
RFT1Q96AA3 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RFT1Q96AA3 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
RFT1Q96AA3 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
RFT1Q96AA3 AC240504.1-201ENST00000395709 845 ntBASIC5.6□□□□□ -1.51
RFT1Q96AA3 AL589994.1-201ENST00000404962 340 ntBASIC5.6□□□□□ -1.51
RFT1Q96AA3 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RFT1Q96AA3 RN7SKP17-201ENST00000411242 351 ntBASIC5.6□□□□□ -1.51
RFT1Q96AA3 RPL18AP14-201ENST00000417685 526 ntBASIC5.6□□□□□ -1.51
RFT1Q96AA3 YWHAZP5-201ENST00000419975 730 ntBASIC5.6□□□□□ -1.51
RFT1Q96AA3 CYP4F30P-202ENST00000420048 405 ntBASIC5.6□□□□□ -1.51
RFT1Q96AA3 AC007562.1-201ENST00000421819 517 ntBASIC5.6□□□□□ -1.51
RFT1Q96AA3 ETF1P1-206ENST00000427296 984 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms