Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC38Q502W7 NLRP3P1-201ENST00000622303 1785 ntBASIC6.74□□□□□ -1.33
CCDC38Q502W7 AC011455.2-201ENST00000599320 3336 ntBASIC6.74□□□□□ -1.33
CCDC38Q502W7 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC38Q502W7 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
CCDC38Q502W7 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
CCDC38Q502W7 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC38Q502W7 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC38Q502W7 AC112255.1-201ENST00000624070 2493 ntBASIC6.73□□□□□ -1.33
CCDC38Q502W7 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
CCDC38Q502W7 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
CCDC38Q502W7 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC38Q502W7 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC38Q502W7 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC38Q502W7 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC38Q502W7 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC38Q502W7 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC38Q502W7 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CCDC38Q502W7 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC38Q502W7 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC38Q502W7 AL050335.1-201ENST00000396909 869 ntBASIC6.73□□□□□ -1.33
CCDC38Q502W7 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC38Q502W7 OR1F12-201ENST00000402365 945 ntBASIC6.73□□□□□ -1.33
CCDC38Q502W7 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC38Q502W7 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.73□□□□□ -1.33
CCDC38Q502W7 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC38Q502W7 AC013470.3-201ENST00000420252 1194 ntBASIC6.73□□□□□ -1.33
CCDC38Q502W7 AC097721.1-201ENST00000427150 1253 ntBASIC6.73□□□□□ -1.33
CCDC38Q502W7 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC38Q502W7 AL158214.1-201ENST00000444423 404 ntBASIC6.73□□□□□ -1.33
CCDC38Q502W7 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC38Q502W7 MTND6P5-201ENST00000448266 512 ntBASIC6.73□□□□□ -1.33
CCDC38Q502W7 RPL31P20-201ENST00000449593 360 ntBASIC6.73□□□□□ -1.33
CCDC38Q502W7 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.73□□□□□ -1.33
CCDC38Q502W7 RPL7AP23-201ENST00000482625 776 ntBASIC6.73□□□□□ -1.33
CCDC38Q502W7 GOLGA5P1-201ENST00000507317 980 ntBASIC6.73□□□□□ -1.33
CCDC38Q502W7 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.73□□□□□ -1.33
CCDC38Q502W7 AC091849.1-201ENST00000509920 121 ntBASIC6.73□□□□□ -1.33
CCDC38Q502W7 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC38Q502W7 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC38Q502W7 RNU6-319P-201ENST00000516025 108 ntBASIC6.73□□□□□ -1.33
CCDC38Q502W7 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC38Q502W7 RBMS2P1-201ENST00000525031 1226 ntBASIC6.73□□□□□ -1.33
CCDC38Q502W7 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC38Q502W7 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC38Q502W7 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC38Q502W7 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC38Q502W7 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC38Q502W7 FCGR1CP-201ENST00000579737 1127 ntBASIC6.73□□□□□ -1.33
CCDC38Q502W7 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC38Q502W7 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC38Q502W7 AC006453.3-201ENST00000635891 377 ntBASIC6.73□□□□□ -1.33
CCDC38Q502W7 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC38Q502W7 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC38Q502W7 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC38Q502W7 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC38Q502W7 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC38Q502W7 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC38Q502W7 HSPD1P1-201ENST00000503199 1726 ntBASIC6.73□□□□□ -1.33
CCDC38Q502W7 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.73□□□□□ -1.33
CCDC38Q502W7 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC38Q502W7 AC004656.1-201ENST00000568479 4951 ntBASIC6.72□□□□□ -1.33
CCDC38Q502W7 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC38Q502W7 AC232271.1-201ENST00000602455 2715 ntBASIC6.72□□□□□ -1.33
CCDC38Q502W7 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC38Q502W7 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC38Q502W7 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC38Q502W7 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
CCDC38Q502W7 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CCDC38Q502W7 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC38Q502W7 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC38Q502W7 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC38Q502W7 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC38Q502W7 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC38Q502W7 RN7SKP130-201ENST00000364924 301 ntBASIC6.72□□□□□ -1.33
CCDC38Q502W7 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC38Q502W7 MIR138-2-201ENST00000384916 84 ntBASIC6.72□□□□□ -1.33
CCDC38Q502W7 CXADRP1-201ENST00000398098 1095 ntBASIC6.72□□□□□ -1.33
CCDC38Q502W7 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
CCDC38Q502W7 AL136100.1-201ENST00000407696 330 ntBASIC6.72□□□□□ -1.33
CCDC38Q502W7 AL139100.1-201ENST00000408001 498 ntBASIC6.72□□□□□ -1.33
CCDC38Q502W7 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC38Q502W7 SEPT7P8-201ENST00000413308 775 ntBASIC6.72□□□□□ -1.33
CCDC38Q502W7 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC38Q502W7 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC38Q502W7 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC38Q502W7 MTND2P11-201ENST00000423638 648 ntBASIC6.72□□□□□ -1.33
CCDC38Q502W7 AC000089.1-201ENST00000424559 801 ntBASIC6.72□□□□□ -1.33
CCDC38Q502W7 ETF1P1-206ENST00000427296 984 ntBASIC6.72□□□□□ -1.33
CCDC38Q502W7 RPS10P21-201ENST00000430654 475 ntBASIC6.72□□□□□ -1.33
CCDC38Q502W7 ZFAND6P1-201ENST00000434138 605 ntBASIC6.72□□□□□ -1.33
CCDC38Q502W7 MRPS33P4-201ENST00000434892 317 ntBASIC6.72□□□□□ -1.33
CCDC38Q502W7 CHCHD4P5-201ENST00000436684 427 ntBASIC6.72□□□□□ -1.33
CCDC38Q502W7 MTCO3P43-201ENST00000440974 771 ntBASIC6.72□□□□□ -1.33
CCDC38Q502W7 RPS7P4-201ENST00000444127 582 ntBASIC6.72□□□□□ -1.33
CCDC38Q502W7 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.72□□□□□ -1.33
CCDC38Q502W7 RAB28P3-201ENST00000448325 597 ntBASIC6.72□□□□□ -1.33
CCDC38Q502W7 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC38Q502W7 AC105918.1-201ENST00000474399 838 ntBASIC6.72□□□□□ -1.33
CCDC38Q502W7 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms