Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH11P55287 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
CDH11P55287 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDH11P55287 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH11P55287 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDH11P55287 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH11P55287 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH11P55287 AC245884.2-201ENST00000426257 404 ntBASIC5.83□□□□□ -1.48
CDH11P55287 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH11P55287 AC010086.1-201ENST00000437359 1052 ntBASIC5.83□□□□□ -1.48
CDH11P55287 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH11P55287 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH11P55287 AC019084.1-201ENST00000457337 432 ntBASIC5.83□□□□□ -1.48
CDH11P55287 AC236972.4-201ENST00000458091 963 ntBASIC5.83□□□□□ -1.48
CDH11P55287 RPS7P10-201ENST00000464254 603 ntBASIC5.83□□□□□ -1.48
CDH11P55287 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH11P55287 AC117394.1-201ENST00000477323 567 ntBASIC5.83□□□□□ -1.48
CDH11P55287 AC098818.1-201ENST00000478593 252 ntBASIC5.83□□□□□ -1.48
CDH11P55287 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CDH11P55287 AL117692.1-201ENST00000494283 713 ntBASIC5.83□□□□□ -1.48
CDH11P55287 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.83□□□□□ -1.48
CDH11P55287 RNU6-964P-201ENST00000516524 69 ntBASIC5.83□□□□□ -1.48
CDH11P55287 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.83□□□□□ -1.48
CDH11P55287 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.83□□□□□ -1.48
CDH11P55287 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH11P55287 AL121579.2-201ENST00000555466 590 ntBASIC5.83□□□□□ -1.48
CDH11P55287 AC037479.1-201ENST00000558361 625 ntBASIC5.83□□□□□ -1.48
CDH11P55287 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.83□□□□□ -1.48
CDH11P55287 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH11P55287 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
CDH11P55287 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH11P55287 ANP32BP1-202ENST00000568553 737 ntBASIC5.83□□□□□ -1.48
CDH11P55287 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CDH11P55287 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH11P55287 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH11P55287 AC011500.1-201ENST00000601963 469 ntBASIC5.83□□□□□ -1.48
CDH11P55287 NDUFB9P1-201ENST00000604683 510 ntBASIC5.83□□□□□ -1.48
CDH11P55287 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH11P55287 AC009779.8-202ENST00000607990 932 ntBASIC5.83□□□□□ -1.48
CDH11P55287 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH11P55287 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.83□□□□□ -1.48
CDH11P55287 AF117829.2-201ENST00000619538 361 ntBASIC5.83□□□□□ -1.48
CDH11P55287 MIR6823-201ENST00000622118 61 ntBASIC5.83□□□□□ -1.48
CDH11P55287 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH11P55287 AC243960.7-201ENST00000623532 707 ntBASIC5.83□□□□□ -1.48
CDH11P55287 AL035425.4-201ENST00000624509 1063 ntBASIC5.83□□□□□ -1.48
CDH11P55287 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH11P55287 CFTRP2-201ENST00000634304 199 ntBASIC5.83□□□□□ -1.48
CDH11P55287 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
CDH11P55287 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CDH11P55287 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH11P55287 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH11P55287 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CDH11P55287 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.83□□□□□ -1.48
CDH11P55287 NCOA4P2-201ENST00000340589 1813 ntBASIC5.83□□□□□ -1.48
CDH11P55287 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
CDH11P55287 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
CDH11P55287 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH11P55287 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH11P55287 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH11P55287 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CDH11P55287 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH11P55287 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH11P55287 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH11P55287 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.82□□□□□ -1.48
CDH11P55287 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH11P55287 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.82□□□□□ -1.48
CDH11P55287 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CDH11P55287 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH11P55287 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH11P55287 OOSP1-201ENST00000398992 1270 ntBASIC5.82□□□□□ -1.48
CDH11P55287 SNORA11.5-201ENST00000408163 128 ntBASIC5.82□□□□□ -1.48
CDH11P55287 U3.43-201ENST00000410734 213 ntBASIC5.82□□□□□ -1.48
CDH11P55287 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH11P55287 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CDH11P55287 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.82□□□□□ -1.48
CDH11P55287 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH11P55287 OR13K1P-201ENST00000444577 975 ntBASIC5.82□□□□□ -1.48
CDH11P55287 AC103563.5-201ENST00000455643 364 ntBASIC5.82□□□□□ -1.48
CDH11P55287 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH11P55287 MTND3P6-201ENST00000485242 339 ntBASIC5.82□□□□□ -1.48
CDH11P55287 AL390198.2-201ENST00000510553 222 ntBASIC5.82□□□□□ -1.48
CDH11P55287 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.82□□□□□ -1.48
CDH11P55287 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.82□□□□□ -1.48
CDH11P55287 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH11P55287 AC008429.2-201ENST00000523057 864 ntBASIC5.82□□□□□ -1.48
CDH11P55287 AP001000.1-201ENST00000526843 742 ntBASIC5.82□□□□□ -1.48
CDH11P55287 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH11P55287 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH11P55287 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC5.82□□□□□ -1.48
CDH11P55287 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.82□□□□□ -1.48
CDH11P55287 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH11P55287 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH11P55287 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH11P55287 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH11P55287 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.82□□□□□ -1.48
CDH11P55287 OR4H6P-201ENST00000563771 921 ntBASIC5.82□□□□□ -1.48
CDH11P55287 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.82□□□□□ -1.48
CDH11P55287 AC074141.1-201ENST00000588129 2995 ntBASIC5.82□□□□□ -1.48
CDH11P55287 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms