Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COPAP53621 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.79□□□□□ -1.32
COPAP53621 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
COPAP53621 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
COPAP53621 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
COPAP53621 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COPAP53621 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COPAP53621 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
COPAP53621 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COPAP53621 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COPAP53621 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.78□□□□□ -1.32
COPAP53621 PSMC1P6-201ENST00000477233 1319 ntBASIC6.78□□□□□ -1.32
COPAP53621 PSMC1P4-201ENST00000515236 1327 ntBASIC6.78□□□□□ -1.32
COPAP53621 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COPAP53621 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COPAP53621 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COPAP53621 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COPAP53621 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COPAP53621 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.78□□□□□ -1.32
COPAP53621 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
COPAP53621 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
COPAP53621 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.78□□□□□ -1.32
COPAP53621 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COPAP53621 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.78□□□□□ -1.32
COPAP53621 MTHFD2P5-201ENST00000320415 844 ntBASIC6.78□□□□□ -1.32
COPAP53621 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COPAP53621 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COPAP53621 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COPAP53621 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.78□□□□□ -1.32
COPAP53621 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.78□□□□□ -1.32
COPAP53621 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC6.78□□□□□ -1.32
COPAP53621 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.78□□□□□ -1.32
COPAP53621 AL138899.2-201ENST00000439139 499 ntBASIC6.78□□□□□ -1.32
COPAP53621 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC6.78□□□□□ -1.32
COPAP53621 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.78□□□□□ -1.32
COPAP53621 AC007383.1-201ENST00000445875 636 ntBASIC6.78□□□□□ -1.32
COPAP53621 AC097359.1-201ENST00000447946 463 ntBASIC6.78□□□□□ -1.32
COPAP53621 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC6.78□□□□□ -1.32
COPAP53621 OR7E22P-201ENST00000478335 1035 ntBASIC6.78□□□□□ -1.32
COPAP53621 SUMO2P4-201ENST00000504193 276 ntBASIC6.78□□□□□ -1.32
COPAP53621 AC093870.1-201ENST00000506837 213 ntBASIC6.78□□□□□ -1.32
COPAP53621 AC021220.1-201ENST00000507445 630 ntBASIC6.78□□□□□ -1.32
COPAP53621 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
COPAP53621 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.78□□□□□ -1.32
COPAP53621 MTND2P17-201ENST00000550281 688 ntBASIC6.78□□□□□ -1.32
COPAP53621 AC026956.1-201ENST00000558741 396 ntBASIC6.78□□□□□ -1.32
COPAP53621 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6.78□□□□□ -1.32
COPAP53621 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.78□□□□□ -1.32
COPAP53621 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.78□□□□□ -1.32
COPAP53621 AC063977.7-201ENST00000594454 337 ntBASIC6.78□□□□□ -1.32
COPAP53621 AC245052.7-201ENST00000601161 359 ntBASIC6.78□□□□□ -1.32
COPAP53621 AC114477.1-201ENST00000605097 605 ntBASIC6.78□□□□□ -1.32
COPAP53621 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.78□□□□□ -1.32
COPAP53621 AL591926.1-201ENST00000620542 217 ntBASIC6.78□□□□□ -1.32
COPAP53621 AC120057.5-201ENST00000623840 154 ntBASIC6.78□□□□□ -1.32
COPAP53621 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.78□□□□□ -1.32
COPAP53621 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
COPAP53621 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COPAP53621 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.78□□□□□ -1.32
COPAP53621 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.78□□□□□ -1.32
COPAP53621 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
COPAP53621 AL513548.1-201ENST00000562904 1724 ntBASIC6.78□□□□□ -1.32
COPAP53621 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
COPAP53621 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COPAP53621 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
COPAP53621 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.77□□□□□ -1.32
COPAP53621 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
COPAP53621 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
COPAP53621 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COPAP53621 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COPAP53621 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
COPAP53621 TNPO1P2-201ENST00000426249 2665 ntBASIC6.77□□□□□ -1.33
COPAP53621 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
COPAP53621 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
COPAP53621 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COPAP53621 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
COPAP53621 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.77□□□□□ -1.33
COPAP53621 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COPAP53621 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.77□□□□□ -1.33
COPAP53621 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COPAP53621 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COPAP53621 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
COPAP53621 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.77□□□□□ -1.33
COPAP53621 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.77□□□□□ -1.33
COPAP53621 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COPAP53621 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.77□□□□□ -1.33
COPAP53621 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COPAP53621 Y_RNA.110-201ENST00000363220 99 ntBASIC6.77□□□□□ -1.33
COPAP53621 RNU1-55P-201ENST00000365510 158 ntBASIC6.77□□□□□ -1.33
COPAP53621 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COPAP53621 U3.52-201ENST00000384034 216 ntBASIC6.77□□□□□ -1.33
COPAP53621 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.77□□□□□ -1.33
COPAP53621 RN7SKP129-201ENST00000410288 299 ntBASIC6.77□□□□□ -1.33
COPAP53621 RN7SKP86-201ENST00000410454 332 ntBASIC6.77□□□□□ -1.33
COPAP53621 MTND4LP17-201ENST00000414607 293 ntBASIC6.77□□□□□ -1.33
COPAP53621 RPL12P43-201ENST00000420608 499 ntBASIC6.77□□□□□ -1.33
COPAP53621 AL451136.1-201ENST00000435399 325 ntBASIC6.77□□□□□ -1.33
COPAP53621 AP000949.1-201ENST00000438328 629 ntBASIC6.77□□□□□ -1.33
COPAP53621 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COPAP53621 CYCSP53-201ENST00000455540 265 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms