Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NFKB1P19838 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC7.68□□□□□ -1.18
NFKB1P19838 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC7.68□□□□□ -1.18
NFKB1P19838 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
NFKB1P19838 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
NFKB1P19838 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NFKB1P19838 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NFKB1P19838 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.68□□□□□ -1.18
NFKB1P19838 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC7.68□□□□□ -1.18
NFKB1P19838 AC074198.1-201ENST00000506546 1397 ntBASIC7.68□□□□□ -1.18
NFKB1P19838 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC7.68□□□□□ -1.18
NFKB1P19838 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
NFKB1P19838 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
NFKB1P19838 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NFKB1P19838 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC7.68□□□□□ -1.18
NFKB1P19838 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
NFKB1P19838 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.68□□□□□ -1.18
NFKB1P19838 MAPK10-279ENST00000641157 2449 ntBASIC7.68□□□□□ -1.18
NFKB1P19838 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NFKB1P19838 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.67□□□□□ -1.18
NFKB1P19838 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NFKB1P19838 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
NFKB1P19838 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NFKB1P19838 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC7.67□□□□□ -1.18
NFKB1P19838 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC7.67□□□□□ -1.18
NFKB1P19838 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.67□□□□□ -1.18
NFKB1P19838 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC7.67□□□□□ -1.18
NFKB1P19838 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC7.67□□□□□ -1.18
NFKB1P19838 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC7.67□□□□□ -1.18
NFKB1P19838 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
NFKB1P19838 HSPA8P11-201ENST00000508840 1898 ntBASIC7.67□□□□□ -1.18
NFKB1P19838 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
NFKB1P19838 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC7.67□□□□□ -1.18
NFKB1P19838 AL391994.1-201ENST00000254724 282 ntBASIC7.67□□□□□ -1.18
NFKB1P19838 AC016716.1-201ENST00000265882 708 ntBASIC7.67□□□□□ -1.18
NFKB1P19838 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NFKB1P19838 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NFKB1P19838 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
NFKB1P19838 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NFKB1P19838 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC7.67□□□□□ -1.18
NFKB1P19838 RN7SKP33-201ENST00000410942 340 ntBASIC7.67□□□□□ -1.18
NFKB1P19838 BX119917.1-201ENST00000432517 502 ntBASIC7.67□□□□□ -1.18
NFKB1P19838 AC241584.1-201ENST00000438469 1241 ntBASIC7.67□□□□□ -1.18
NFKB1P19838 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC7.67□□□□□ -1.18
NFKB1P19838 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC7.67□□□□□ -1.18
NFKB1P19838 AC002553.1-201ENST00000442828 802 ntBASIC7.67□□□□□ -1.18
NFKB1P19838 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC7.67□□□□□ -1.18
NFKB1P19838 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC7.67□□□□□ -1.18
NFKB1P19838 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC7.67□□□□□ -1.18
NFKB1P19838 AC236972.4-201ENST00000458091 963 ntBASIC7.67□□□□□ -1.18
NFKB1P19838 AC096922.1-201ENST00000461635 651 ntBASIC7.67□□□□□ -1.18
NFKB1P19838 RPL31P58-201ENST00000469001 379 ntBASIC7.67□□□□□ -1.18
NFKB1P19838 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC7.67□□□□□ -1.18
NFKB1P19838 RN7SL751P-201ENST00000473281 284 ntBASIC7.67□□□□□ -1.18
NFKB1P19838 AC105918.1-201ENST00000474399 838 ntBASIC7.67□□□□□ -1.18
NFKB1P19838 AC107956.2-201ENST00000496042 454 ntBASIC7.67□□□□□ -1.18
NFKB1P19838 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC7.67□□□□□ -1.18
NFKB1P19838 AC096751.1-202ENST00000502691 1067 ntBASIC7.67□□□□□ -1.18
NFKB1P19838 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC7.67□□□□□ -1.18
NFKB1P19838 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
NFKB1P19838 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
NFKB1P19838 MTND2P33-201ENST00000506452 1031 ntBASIC7.67□□□□□ -1.18
NFKB1P19838 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC7.67□□□□□ -1.18
NFKB1P19838 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NFKB1P19838 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC7.67□□□□□ -1.18
NFKB1P19838 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC7.67□□□□□ -1.18
NFKB1P19838 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NFKB1P19838 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC7.67□□□□□ -1.18
NFKB1P19838 MS4A12-205ENST00000537076 1019 ntTSL 5 BASIC7.67□□□□□ -1.18
NFKB1P19838 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC7.67□□□□□ -1.18
NFKB1P19838 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NFKB1P19838 NPM1P47-201ENST00000560843 856 ntBASIC7.67□□□□□ -1.18
NFKB1P19838 AC116553.2-201ENST00000564203 463 ntBASIC7.67□□□□□ -1.18
NFKB1P19838 AC092133.1-201ENST00000565828 719 ntBASIC7.67□□□□□ -1.18
NFKB1P19838 AC009118.1-201ENST00000566019 374 ntTSL 2 BASIC7.67□□□□□ -1.18
NFKB1P19838 AC009101.1-201ENST00000568135 242 ntBASIC7.67□□□□□ -1.18
NFKB1P19838 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC7.67□□□□□ -1.18
NFKB1P19838 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC7.67□□□□□ -1.18
NFKB1P19838 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC7.67□□□□□ -1.18
NFKB1P19838 SNRPCP20-201ENST00000588011 210 ntBASIC7.67□□□□□ -1.18
NFKB1P19838 AC009237.13-201ENST00000603193 276 ntBASIC7.67□□□□□ -1.18
NFKB1P19838 AC018618.2-201ENST00000604770 446 ntBASIC7.67□□□□□ -1.18
NFKB1P19838 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC7.67□□□□□ -1.18
NFKB1P19838 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC7.67□□□□□ -1.18
NFKB1P19838 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NFKB1P19838 AL391903.2-201ENST00000614532 247 ntBASIC7.67□□□□□ -1.18
NFKB1P19838 RN7SL820P-201ENST00000616437 299 ntBASIC7.67□□□□□ -1.18
NFKB1P19838 OR5AK4P-201ENST00000635912 903 ntBASIC7.67□□□□□ -1.18
NFKB1P19838 AC099654.12-201ENST00000639868 649 ntBASIC7.67□□□□□ -1.18
NFKB1P19838 LINC01808-202ENST00000641680 1116 ntBASIC7.67□□□□□ -1.18
NFKB1P19838 PDZK1P1-202ENST00000425209 1350 ntBASIC7.67□□□□□ -1.18
NFKB1P19838 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC7.67□□□□□ -1.18
NFKB1P19838 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NFKB1P19838 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
NFKB1P19838 AC020978.8-201ENST00000571975 3022 ntBASIC7.67□□□□□ -1.18
NFKB1P19838 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NFKB1P19838 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.67□□□□□ -1.18
NFKB1P19838 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NFKB1P19838 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NFKB1P19838 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms