Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 AL117378.2-201ENST00000622916 1337 ntBASIC6.23□□□□□ -1.41
HLA-DQB2P05538 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 AC027575.3-201ENST00000583058 2747 ntBASIC6.22□□□□□ -1.41
HLA-DQB2P05538 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 AC119674.1-202ENST00000641333 1860 ntBASIC6.22□□□□□ -1.41
HLA-DQB2P05538 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 RBBP4P5-201ENST00000398583 1266 ntBASIC6.22□□□□□ -1.41
HLA-DQB2P05538 RNA5SP156-201ENST00000410250 110 ntBASIC6.22□□□□□ -1.41
HLA-DQB2P05538 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 IGLV3-4-201ENST00000432300 244 ntBASIC6.22□□□□□ -1.41
HLA-DQB2P05538 AC010240.2-201ENST00000445363 1205 ntBASIC6.22□□□□□ -1.41
HLA-DQB2P05538 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 OR7E99P-201ENST00000505750 922 ntBASIC6.22□□□□□ -1.41
HLA-DQB2P05538 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 AC018797.1-201ENST00000510791 255 ntBASIC6.22□□□□□ -1.41
HLA-DQB2P05538 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 MAST4-IT1-201ENST00000514241 658 ntBASIC6.22□□□□□ -1.41
HLA-DQB2P05538 CR383658.1-201ENST00000514609 734 ntBASIC6.22□□□□□ -1.41
HLA-DQB2P05538 RN7SKP183-201ENST00000517169 324 ntBASIC6.22□□□□□ -1.41
HLA-DQB2P05538 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 AL512652.1-201ENST00000619006 500 ntBASIC6.22□□□□□ -1.41
HLA-DQB2P05538 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.22□□□□□ -1.41
HLA-DQB2P05538 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
HLA-DQB2P05538 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
HLA-DQB2P05538 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
HLA-DQB2P05538 AC005725.1-201ENST00000577346 2607 ntBASIC6.21□□□□□ -1.41
HLA-DQB2P05538 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 SNORA21-201ENST00000362423 132 ntBASIC6.21□□□□□ -1.42
HLA-DQB2P05538 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 AL451046.1-201ENST00000406097 534 ntBASIC6.21□□□□□ -1.42
HLA-DQB2P05538 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.21□□□□□ -1.42
HLA-DQB2P05538 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.21□□□□□ -1.42
HLA-DQB2P05538 AC002553.3-201ENST00000453002 341 ntBASIC6.21□□□□□ -1.42
HLA-DQB2P05538 RN7SL254P-201ENST00000460609 284 ntBASIC6.21□□□□□ -1.42
HLA-DQB2P05538 AC104339.1-201ENST00000465478 348 ntBASIC6.21□□□□□ -1.42
HLA-DQB2P05538 AC005165.2-201ENST00000466070 380 ntBASIC6.21□□□□□ -1.42
HLA-DQB2P05538 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 AL035690.1-201ENST00000490892 383 ntBASIC6.21□□□□□ -1.42
HLA-DQB2P05538 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 AC108103.1-201ENST00000511286 446 ntBASIC6.21□□□□□ -1.42
HLA-DQB2P05538 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DQB2P05538 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms