Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LITAFQ99732 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.4□□□□□ -1.71
LITAFQ99732 OR51A1P-201ENST00000511110 946 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LITAFQ99732 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC4.4□□□□□ -1.71
LITAFQ99732 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.4□□□□□ -1.71
LITAFQ99732 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC4.4□□□□□ -1.71
LITAFQ99732 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC4.4□□□□□ -1.71
LITAFQ99732 AC123767.1-204ENST00000523523 273 ntTSL 3 BASIC4.4□□□□□ -1.71
LITAFQ99732 AP001636.2-201ENST00000525517 696 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 AP001767.2-201ENST00000527291 382 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.4□□□□□ -1.71
LITAFQ99732 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LITAFQ99732 NPM1P5-201ENST00000557228 838 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.4□□□□□ -1.71
LITAFQ99732 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC4.4□□□□□ -1.71
LITAFQ99732 AC090651.1-201ENST00000567865 634 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.4□□□□□ -1.71
LITAFQ99732 MIR5192-201ENST00000579892 92 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.4□□□□□ -1.71
LITAFQ99732 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.4□□□□□ -1.71
LITAFQ99732 ZNF98-205ENST00000601553 566 ntTSL 3 BASIC4.4□□□□□ -1.71
LITAFQ99732 AL606834.3-201ENST00000602615 496 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 SLC25A6P5-202ENST00000602729 1038 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.4□□□□□ -1.71
LITAFQ99732 AC023310.4-201ENST00000613130 650 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 AC024255.1-201ENST00000614376 102 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LITAFQ99732 AC078880.5-201ENST00000617845 421 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 AC005790.1-201ENST00000619774 450 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
LITAFQ99732 AC006963.1-201ENST00000624003 1052 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 AP000676.4-201ENST00000624659 623 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC4.4□□□□□ -1.71
LITAFQ99732 SNORA16A-202ENST00000628458 135 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 MTND2P41-201ENST00000637599 773 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 OR7E161P-202ENST00000641994 1033 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LITAFQ99732 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC4.4□□□□□ -1.71
LITAFQ99732 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC4.4□□□□□ -1.71
LITAFQ99732 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
LITAFQ99732 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LITAFQ99732 AL049634.1-201ENST00000453770 1720 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
LITAFQ99732 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
LITAFQ99732 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
LITAFQ99732 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
LITAFQ99732 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LITAFQ99732 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC4.4□□□□□ -1.71
LITAFQ99732 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC4.4□□□□□ -1.71
LITAFQ99732 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC4.4□□□□□ -1.71
LITAFQ99732 NLRP3P1-201ENST00000622303 1785 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 AL512329.1-201ENST00000404600 1592 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
LITAFQ99732 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LITAFQ99732 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
LITAFQ99732 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
LITAFQ99732 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LITAFQ99732 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC4.39□□□□□ -1.71
LITAFQ99732 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
LITAFQ99732 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LITAFQ99732 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LITAFQ99732 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
LITAFQ99732 OLFM5P-201ENST00000411807 1478 ntBASIC4.39□□□□□ -1.71
LITAFQ99732 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LITAFQ99732 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC4.39□□□□□ -1.71
LITAFQ99732 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC4.39□□□□□ -1.71
LITAFQ99732 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
LITAFQ99732 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LITAFQ99732 ZNF29P-201ENST00000225587 168 ntBASIC4.39□□□□□ -1.71
LITAFQ99732 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LITAFQ99732 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LITAFQ99732 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
LITAFQ99732 TSACC-202ENST00000368252 491 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LITAFQ99732 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC4.39□□□□□ -1.71
LITAFQ99732 ARMCX7P-201ENST00000372828 562 ntBASIC4.39□□□□□ -1.71
LITAFQ99732 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
LITAFQ99732 RPL22P22-201ENST00000395439 379 ntBASIC4.39□□□□□ -1.71
LITAFQ99732 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LITAFQ99732 AL359715.1-201ENST00000404330 555 ntBASIC4.39□□□□□ -1.71
LITAFQ99732 AL355615.1-201ENST00000406187 641 ntBASIC4.39□□□□□ -1.71
LITAFQ99732 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC4.39□□□□□ -1.71
LITAFQ99732 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LITAFQ99732 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC4.39□□□□□ -1.71
LITAFQ99732 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.39□□□□□ -1.71
LITAFQ99732 AC007562.1-201ENST00000421819 517 ntBASIC4.39□□□□□ -1.71
LITAFQ99732 AC241520.1-201ENST00000422654 1099 ntBASIC4.39□□□□□ -1.71
LITAFQ99732 PTP4A1P7-201ENST00000423476 514 ntBASIC4.39□□□□□ -1.71
LITAFQ99732 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.39□□□□□ -1.71
LITAFQ99732 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.39□□□□□ -1.71
LITAFQ99732 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.39□□□□□ -1.71
LITAFQ99732 AL606752.1-201ENST00000435442 666 ntBASIC4.39□□□□□ -1.71
LITAFQ99732 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LITAFQ99732 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC4.39□□□□□ -1.71
LITAFQ99732 AC006994.1-201ENST00000438212 839 ntBASIC4.39□□□□□ -1.71
LITAFQ99732 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC4.39□□□□□ -1.71
LITAFQ99732 AC079922.1-201ENST00000443291 359 ntBASIC4.39□□□□□ -1.71
LITAFQ99732 AC023274.2-201ENST00000445264 521 ntBASIC4.39□□□□□ -1.71
LITAFQ99732 EXOSC3P1-201ENST00000448649 500 ntBASIC4.39□□□□□ -1.71
LITAFQ99732 RPL7P55-201ENST00000450522 746 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms