Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 AC009120.3-201ENST00000563335 499 ntBASIC4.68□□□□□ -1.66
AP1S3Q96PC3 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 AL161931.1-201ENST00000612768 246 ntBASIC4.68□□□□□ -1.66
AP1S3Q96PC3 AC024255.1-201ENST00000614376 102 ntBASIC4.68□□□□□ -1.66
AP1S3Q96PC3 AC006328.2-201ENST00000623198 397 ntBASIC4.68□□□□□ -1.66
AP1S3Q96PC3 AC005753.1-201ENST00000623837 618 ntBASIC4.68□□□□□ -1.66
AP1S3Q96PC3 AC012005.2-201ENST00000624333 397 ntBASIC4.68□□□□□ -1.66
AP1S3Q96PC3 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 AL603750.1-201ENST00000624216 1717 ntBASIC4.68□□□□□ -1.66
AP1S3Q96PC3 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
AP1S3Q96PC3 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 BIN2P1-201ENST00000504996 1530 ntBASIC4.67□□□□□ -1.66
AP1S3Q96PC3 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 AL138847.1-201ENST00000258651 546 ntBASIC4.67□□□□□ -1.66
AP1S3Q96PC3 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 RNA5SP321-201ENST00000362722 111 ntBASIC4.67□□□□□ -1.66
AP1S3Q96PC3 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 RNU1-56P-201ENST00000391303 164 ntBASIC4.67□□□□□ -1.66
AP1S3Q96PC3 AC245036.1-201ENST00000391727 309 ntBASIC4.67□□□□□ -1.66
AP1S3Q96PC3 AL121835.1-201ENST00000404250 354 ntBASIC4.67□□□□□ -1.66
AP1S3Q96PC3 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 RPLP1P10-201ENST00000413972 339 ntBASIC4.67□□□□□ -1.66
AP1S3Q96PC3 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.67□□□□□ -1.66
AP1S3Q96PC3 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 AC092106.2-201ENST00000436597 487 ntBASIC4.67□□□□□ -1.66
AP1S3Q96PC3 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 AC126615.1-201ENST00000470084 630 ntBASIC4.67□□□□□ -1.66
AP1S3Q96PC3 RN7SL223P-201ENST00000470401 294 ntBASIC4.67□□□□□ -1.66
AP1S3Q96PC3 RPL10P7-201ENST00000495649 625 ntBASIC4.67□□□□□ -1.66
AP1S3Q96PC3 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 AP001646.2-201ENST00000528645 1156 ntBASIC4.67□□□□□ -1.66
AP1S3Q96PC3 AP006437.1-202ENST00000530327 933 ntBASIC4.67□□□□□ -1.66
AP1S3Q96PC3 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 PDCL3P1-201ENST00000534575 734 ntBASIC4.67□□□□□ -1.66
AP1S3Q96PC3 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 FRG2IP-201ENST00000563581 781 ntBASIC4.67□□□□□ -1.66
AP1S3Q96PC3 MIR4262-201ENST00000578394 54 ntBASIC4.67□□□□□ -1.66
AP1S3Q96PC3 MIR378C-201ENST00000578683 81 ntBASIC4.67□□□□□ -1.66
AP1S3Q96PC3 MIR4428-201ENST00000584884 73 ntBASIC4.67□□□□□ -1.66
AP1S3Q96PC3 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 AP001357.1-201ENST00000586304 1053 ntBASIC4.67□□□□□ -1.66
AP1S3Q96PC3 AC025857.2-201ENST00000602711 238 ntBASIC4.67□□□□□ -1.66
AP1S3Q96PC3 PRR13P3-201ENST00000603578 376 ntBASIC4.67□□□□□ -1.66
AP1S3Q96PC3 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 AC073869.7-201ENST00000640874 297 ntBASIC4.67□□□□□ -1.66
AP1S3Q96PC3 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
AP1S3Q96PC3 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms