Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CCDC71LQ8N9Z2 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CCDC71LQ8N9Z2 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC71LQ8N9Z2 AC011416.1-201ENST00000514947 1732 ntBASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 AL121977.1-201ENST00000401636 979 ntBASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 AL359633.1-201ENST00000421403 310 ntBASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 AC009362.1-201ENST00000427253 406 ntBASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 AL590399.2-201ENST00000427536 309 ntBASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 IGLV3-4-201ENST00000432300 244 ntBASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 AC083855.1-201ENST00000440041 258 ntBASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 RN7SL223P-201ENST00000470401 294 ntBASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 AC090589.1-201ENST00000473109 362 ntBASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 AC093719.1-201ENST00000480427 441 ntBASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 RN7SL868P-201ENST00000485915 303 ntBASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 NPIPB1P-202ENST00000588786 828 ntBASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 EXOSC3P2-201ENST00000594464 497 ntBASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 AC024085.1-201ENST00000604299 432 ntBASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 AL512356.3-201ENST00000623005 461 ntBASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 AC061999.1-201ENST00000624454 177 ntBASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 AC005355.2-201ENST00000625064 484 ntBASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 AC009950.2-201ENST00000636548 183 ntBASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 MAPK10-350ENST00000641777 965 ntBASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 KYNUP3-201ENST00000574386 1341 ntBASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 AC007342.5-201ENST00000571340 2142 ntBASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC71LQ8N9Z2 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 HDAC1P2-201ENST00000453661 1398 ntBASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 AP001541.1-201ENST00000623322 1904 ntBASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 AC100810.3-201ENST00000633189 2240 ntBASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 MRPS6P2-201ENST00000381143 370 ntBASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 AC092651.1-201ENST00000426110 312 ntBASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 RN7SL456P-201ENST00000469290 295 ntBASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 AC135999.1-201ENST00000478962 479 ntBASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 AC008945.1-201ENST00000505144 499 ntBASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 AC021733.2-201ENST00000518830 497 ntBASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 AC020937.1-201ENST00000519677 1013 ntBASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 NPM1P42-201ENST00000560329 862 ntBASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 MIR132-201ENST00000591554 101 ntBASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 SNORD96A-201ENST00000606577 79 ntBASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 AC127071.2-201ENST00000623293 527 ntBASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms