Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
VPS8Q8N3P4 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS8Q8N3P4 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC9.51□□□□□ -0.89
VPS8Q8N3P4 AC110716.2-201ENST00000563865 3945 ntBASIC9.51□□□□□ -0.89
VPS8Q8N3P4 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS8Q8N3P4 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC9.51□□□□□ -0.89
VPS8Q8N3P4 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS8Q8N3P4 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS8Q8N3P4 TMSB4XP2-201ENST00000335179 210 ntBASIC9.51□□□□□ -0.89
VPS8Q8N3P4 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
VPS8Q8N3P4 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC9.51□□□□□ -0.89
VPS8Q8N3P4 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
VPS8Q8N3P4 SDC4P-201ENST00000453285 601 ntBASIC9.51□□□□□ -0.89
VPS8Q8N3P4 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC9.51□□□□□ -0.89
VPS8Q8N3P4 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
VPS8Q8N3P4 AC027667.1-201ENST00000545814 304 ntBASIC9.51□□□□□ -0.89
VPS8Q8N3P4 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC9.51□□□□□ -0.89
VPS8Q8N3P4 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC9.51□□□□□ -0.89
VPS8Q8N3P4 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC9.51□□□□□ -0.89
VPS8Q8N3P4 AC004890.3-201ENST00000605566 1095 ntBASIC9.51□□□□□ -0.89
VPS8Q8N3P4 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
VPS8Q8N3P4 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC9.51□□□□□ -0.89
VPS8Q8N3P4 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
VPS8Q8N3P4 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
VPS8Q8N3P4 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
VPS8Q8N3P4 USP9YP3-201ENST00000434481 1766 ntBASIC9.51□□□□□ -0.89
VPS8Q8N3P4 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
VPS8Q8N3P4 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 AC008937.3-201ENST00000606813 1700 ntBASIC9.5□□□□□ -0.89
VPS8Q8N3P4 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 OR10R3P-201ENST00000361688 942 ntBASIC9.5□□□□□ -0.89
VPS8Q8N3P4 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 HMGN1P20-201ENST00000411849 300 ntBASIC9.5□□□□□ -0.89
VPS8Q8N3P4 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 EIF5AP4-201ENST00000441206 465 ntBASIC9.5□□□□□ -0.89
VPS8Q8N3P4 AC016724.1-201ENST00000453215 421 ntBASIC9.5□□□□□ -0.89
VPS8Q8N3P4 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 AC023245.1-201ENST00000468501 517 ntBASIC9.5□□□□□ -0.89
VPS8Q8N3P4 AC006499.4-201ENST00000510947 694 ntBASIC9.5□□□□□ -0.89
VPS8Q8N3P4 AC114781.3-201ENST00000512083 142 ntBASIC9.5□□□□□ -0.89
VPS8Q8N3P4 AC110056.1-201ENST00000525759 911 ntBASIC9.5□□□□□ -0.89
VPS8Q8N3P4 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 AC090651.1-201ENST00000567865 634 ntBASIC9.5□□□□□ -0.89
VPS8Q8N3P4 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS8Q8N3P4 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS8Q8N3P4 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC9.49□□□□□ -0.89
VPS8Q8N3P4 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC9.49□□□□□ -0.89
VPS8Q8N3P4 RNA5SP375-201ENST00000362975 119 ntBASIC9.49□□□□□ -0.89
VPS8Q8N3P4 AC007562.1-201ENST00000421819 517 ntBASIC9.49□□□□□ -0.89
VPS8Q8N3P4 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS8Q8N3P4 RPL12P11-201ENST00000439970 501 ntBASIC9.49□□□□□ -0.89
VPS8Q8N3P4 AC023274.2-201ENST00000445264 521 ntBASIC9.49□□□□□ -0.89
VPS8Q8N3P4 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC9.49□□□□□ -0.89
VPS8Q8N3P4 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC9.49□□□□□ -0.89
VPS8Q8N3P4 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC9.49□□□□□ -0.89
VPS8Q8N3P4 AC015982.1-201ENST00000608113 465 ntBASIC9.49□□□□□ -0.89
VPS8Q8N3P4 AL359195.2-201ENST00000623657 4412 ntBASIC9.49□□□□□ -0.89
VPS8Q8N3P4 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS8Q8N3P4 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS8Q8N3P4 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
VPS8Q8N3P4 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS8Q8N3P4 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
VPS8Q8N3P4 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS8Q8N3P4 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
VPS8Q8N3P4 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
VPS8Q8N3P4 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC9.49□□□□□ -0.89
VPS8Q8N3P4 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 MIR1203-201ENST00000408812 85 ntBASIC9.48□□□□□ -0.89
VPS8Q8N3P4 AC115283.1-201ENST00000427353 400 ntBASIC9.48□□□□□ -0.89
VPS8Q8N3P4 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC9.48□□□□□ -0.89
VPS8Q8N3P4 AL445928.1-201ENST00000435545 222 ntBASIC9.48□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms