Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
H3F3CQ6NXT2 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.89□□□□□ -1.47
H3F3CQ6NXT2 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
H3F3CQ6NXT2 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
H3F3CQ6NXT2 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
H3F3CQ6NXT2 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.89□□□□□ -1.47
H3F3CQ6NXT2 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
H3F3CQ6NXT2 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
H3F3CQ6NXT2 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.89□□□□□ -1.47
H3F3CQ6NXT2 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
H3F3CQ6NXT2 AC006600.2-201ENST00000624834 2506 ntBASIC5.89□□□□□ -1.47
H3F3CQ6NXT2 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
H3F3CQ6NXT2 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.89□□□□□ -1.47
H3F3CQ6NXT2 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
H3F3CQ6NXT2 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
H3F3CQ6NXT2 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
H3F3CQ6NXT2 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 AL078595.2-201ENST00000605309 1780 ntBASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 AC005332.9-201ENST00000620266 2921 ntBASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 RNA5SP350-201ENST00000363298 111 ntBASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 AL050335.1-201ENST00000396909 869 ntBASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 GCNT1P4-201ENST00000404096 329 ntBASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 RNA5SP115-201ENST00000411160 107 ntBASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 AL353626.3-201ENST00000413399 657 ntBASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 OR52I1-201ENST00000450052 1050 ntBASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 Z83838.1-202ENST00000456225 839 ntBASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 RN7SL326P-201ENST00000477493 296 ntBASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 AC092824.1-201ENST00000483524 576 ntBASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 MAST4-IT1-201ENST00000514241 658 ntBASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 IGKV1D-22-201ENST00000518953 324 ntBASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 AC084337.1-201ENST00000524809 686 ntBASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 AP000662.1-201ENST00000530952 487 ntBASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 AC002310.3-201ENST00000569728 723 ntBASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 RPSAP75-201ENST00000605848 301 ntBASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 IFIT1P1-201ENST00000400497 1449 ntBASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 AC104966.1-201ENST00000467010 1464 ntBASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 AC025809.2-201ENST00000625085 1802 ntBASIC5.88□□□□□ -1.47
H3F3CQ6NXT2 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 AC022905.1-201ENST00000503430 3048 ntBASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 OR2W4P-201ENST00000406496 926 ntBASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 RPL7AP14-201ENST00000424041 802 ntBASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 AC002069.1-201ENST00000429649 1159 ntBASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 IGLV3-4-201ENST00000432300 244 ntBASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 AL590004.3-202ENST00000445883 451 ntBASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 AC128716.1-201ENST00000475129 166 ntBASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 AP002453.1-201ENST00000492327 668 ntBASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 OR4D12P-201ENST00000509361 911 ntBASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 AC106800.3-201ENST00000511389 308 ntBASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 AC009879.1-201ENST00000520029 839 ntBASIC5.87□□□□□ -1.47
H3F3CQ6NXT2 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms