Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 RPL7L1P3-201ENST00000455249 689 ntBASIC5.12□□□□□ -1.59
PAX9P55771 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.12□□□□□ -1.59
PAX9P55771 AC093827.1-201ENST00000480094 861 ntBASIC5.12□□□□□ -1.59
PAX9P55771 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.12□□□□□ -1.59
PAX9P55771 AC025271.1-201ENST00000485045 429 ntBASIC5.12□□□□□ -1.59
PAX9P55771 RN7SL776P-201ENST00000493390 268 ntBASIC5.12□□□□□ -1.59
PAX9P55771 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.12□□□□□ -1.59
PAX9P55771 AC010409.2-201ENST00000505780 478 ntBASIC5.12□□□□□ -1.59
PAX9P55771 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PAX9P55771 RNA5SP318-201ENST00000516352 92 ntBASIC5.12□□□□□ -1.59
PAX9P55771 CASC11-203ENST00000519071 791 ntTSL 3 BASIC5.12□□□□□ -1.59
PAX9P55771 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.12□□□□□ -1.59
PAX9P55771 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC5.12□□□□□ -1.59
PAX9P55771 HNRNPCP8-201ENST00000528764 888 ntBASIC5.12□□□□□ -1.59
PAX9P55771 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.12□□□□□ -1.59
PAX9P55771 SETP17-201ENST00000534163 817 ntBASIC5.12□□□□□ -1.59
PAX9P55771 AC025423.2-201ENST00000537570 439 ntBASIC5.12□□□□□ -1.59
PAX9P55771 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.12□□□□□ -1.59
PAX9P55771 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.12□□□□□ -1.59
PAX9P55771 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.12□□□□□ -1.59
PAX9P55771 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC5.12□□□□□ -1.59
PAX9P55771 RN7SL208P-201ENST00000577964 296 ntBASIC5.12□□□□□ -1.59
PAX9P55771 AC006120.1-201ENST00000579375 546 ntBASIC5.12□□□□□ -1.59
PAX9P55771 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.12□□□□□ -1.59
PAX9P55771 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC5.12□□□□□ -1.59
PAX9P55771 AP001267.4-201ENST00000602598 545 ntBASIC5.12□□□□□ -1.59
PAX9P55771 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.12□□□□□ -1.59
PAX9P55771 AC091133.5-201ENST00000603088 301 ntBASIC5.12□□□□□ -1.59
PAX9P55771 AC022387.2-201ENST00000604050 448 ntBASIC5.12□□□□□ -1.59
PAX9P55771 AC024085.1-201ENST00000604299 432 ntBASIC5.12□□□□□ -1.59
PAX9P55771 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.12□□□□□ -1.59
PAX9P55771 LSM1P2-201ENST00000604911 322 ntBASIC5.12□□□□□ -1.59
PAX9P55771 AL136097.3-201ENST00000611097 505 ntBASIC5.12□□□□□ -1.59
PAX9P55771 MIR6731-201ENST00000614863 72 ntBASIC5.12□□□□□ -1.59
PAX9P55771 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.12□□□□□ -1.59
PAX9P55771 HPVC1-201ENST00000629899 1198 ntBASIC5.12□□□□□ -1.59
PAX9P55771 MIR665-201ENST00000635949 72 ntBASIC5.12□□□□□ -1.59
PAX9P55771 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
PAX9P55771 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
PAX9P55771 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
PAX9P55771 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PAX9P55771 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
PAX9P55771 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.12□□□□□ -1.59
PAX9P55771 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PAX9P55771 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PAX9P55771 EEF1A1P28-201ENST00000450915 1403 ntBASIC5.12□□□□□ -1.59
PAX9P55771 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PAX9P55771 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PAX9P55771 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC5.12□□□□□ -1.59
PAX9P55771 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
PAX9P55771 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
PAX9P55771 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
PAX9P55771 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.11□□□□□ -1.59
PAX9P55771 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
PAX9P55771 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PAX9P55771 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
PAX9P55771 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PAX9P55771 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PAX9P55771 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
PAX9P55771 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PAX9P55771 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PAX9P55771 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PAX9P55771 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.11□□□□□ -1.59
PAX9P55771 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PAX9P55771 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PAX9P55771 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PAX9P55771 RNA5SP321-201ENST00000362722 111 ntBASIC5.11□□□□□ -1.59
PAX9P55771 MT-RNR1-201ENST00000389680 954 ntBASIC5.11□□□□□ -1.59
PAX9P55771 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PAX9P55771 RNU1-56P-201ENST00000391303 164 ntBASIC5.11□□□□□ -1.59
PAX9P55771 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PAX9P55771 AL121977.1-201ENST00000401636 979 ntBASIC5.11□□□□□ -1.59
PAX9P55771 AL590635.1-201ENST00000406314 586 ntBASIC5.11□□□□□ -1.59
PAX9P55771 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PAX9P55771 AL662791.3-201ENST00000413771 776 ntBASIC5.11□□□□□ -1.59
PAX9P55771 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.11□□□□□ -1.59
PAX9P55771 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.11□□□□□ -1.59
PAX9P55771 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.11□□□□□ -1.59
PAX9P55771 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.11□□□□□ -1.59
PAX9P55771 SNRPBP1-201ENST00000443634 282 ntBASIC5.11□□□□□ -1.59
PAX9P55771 AL353803.3-201ENST00000444641 335 ntBASIC5.11□□□□□ -1.59
PAX9P55771 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PAX9P55771 REG1CP-206ENST00000447469 496 ntBASIC5.11□□□□□ -1.59
PAX9P55771 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC5.11□□□□□ -1.59
PAX9P55771 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.11□□□□□ -1.59
PAX9P55771 RWDD4P1-201ENST00000488019 565 ntBASIC5.11□□□□□ -1.59
PAX9P55771 AC090058.1-201ENST00000498788 435 ntBASIC5.11□□□□□ -1.59
PAX9P55771 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
PAX9P55771 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.11□□□□□ -1.59
PAX9P55771 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.11□□□□□ -1.59
PAX9P55771 AC106800.3-201ENST00000511389 308 ntBASIC5.11□□□□□ -1.59
PAX9P55771 AC010442.1-201ENST00000515583 816 ntBASIC5.11□□□□□ -1.59
PAX9P55771 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.11□□□□□ -1.59
PAX9P55771 AC107952.1-201ENST00000524200 376 ntBASIC5.11□□□□□ -1.59
PAX9P55771 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.11□□□□□ -1.59
PAX9P55771 AP000619.2-201ENST00000546014 969 ntBASIC5.11□□□□□ -1.59
PAX9P55771 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC5.11□□□□□ -1.59
PAX9P55771 AC009120.3-201ENST00000563335 499 ntBASIC5.11□□□□□ -1.59
PAX9P55771 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PAX9P55771 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms