Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 UBBP5-201ENST00000446970 266 ntBASIC5.94□□□□□ -1.46
CDH12P55289 AC092967.1-201ENST00000449016 481 ntBASIC5.94□□□□□ -1.46
CDH12P55289 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.94□□□□□ -1.46
CDH12P55289 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDH12P55289 AC008868.1-201ENST00000509786 737 ntBASIC5.94□□□□□ -1.46
CDH12P55289 AC134698.1-201ENST00000511619 643 ntBASIC5.94□□□□□ -1.46
CDH12P55289 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.94□□□□□ -1.46
CDH12P55289 SCARNA5-201ENST00000516201 276 ntBASIC5.94□□□□□ -1.46
CDH12P55289 SNORA26.10-201ENST00000516427 141 ntBASIC5.94□□□□□ -1.46
CDH12P55289 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC5.94□□□□□ -1.46
CDH12P55289 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.94□□□□□ -1.46
CDH12P55289 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.94□□□□□ -1.46
CDH12P55289 AC130366.1-201ENST00000526505 1192 ntBASIC5.94□□□□□ -1.46
CDH12P55289 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.94□□□□□ -1.46
CDH12P55289 AC103855.4-201ENST00000533158 265 ntBASIC5.94□□□□□ -1.46
CDH12P55289 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.94□□□□□ -1.46
CDH12P55289 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CDH12P55289 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.94□□□□□ -1.46
CDH12P55289 AL136520.1-202ENST00000555494 763 ntBASIC5.94□□□□□ -1.46
CDH12P55289 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.94□□□□□ -1.46
CDH12P55289 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.94□□□□□ -1.46
CDH12P55289 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CDH12P55289 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.94□□□□□ -1.46
CDH12P55289 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.94□□□□□ -1.46
CDH12P55289 MTND2P13-201ENST00000577438 1039 ntBASIC5.94□□□□□ -1.46
CDH12P55289 RN7SL208P-201ENST00000577964 296 ntBASIC5.94□□□□□ -1.46
CDH12P55289 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.94□□□□□ -1.46
CDH12P55289 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.94□□□□□ -1.46
CDH12P55289 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.94□□□□□ -1.46
CDH12P55289 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC5.94□□□□□ -1.46
CDH12P55289 RPS4XP21-201ENST00000603814 750 ntBASIC5.94□□□□□ -1.46
CDH12P55289 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.94□□□□□ -1.46
CDH12P55289 AC007671.1-201ENST00000616957 830 ntBASIC5.94□□□□□ -1.46
CDH12P55289 AC009032.1-201ENST00000617574 431 ntBASIC5.94□□□□□ -1.46
CDH12P55289 AL162233.1-201ENST00000620014 944 ntBASIC5.94□□□□□ -1.46
CDH12P55289 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.94□□□□□ -1.46
CDH12P55289 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH12P55289 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.94□□□□□ -1.46
CDH12P55289 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.94□□□□□ -1.46
CDH12P55289 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDH12P55289 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.94□□□□□ -1.46
CDH12P55289 KYNUP2-201ENST00000582280 1329 ntBASIC5.94□□□□□ -1.46
CDH12P55289 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CDH12P55289 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CDH12P55289 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDH12P55289 AC005725.1-201ENST00000577346 2607 ntBASIC5.94□□□□□ -1.46
CDH12P55289 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH12P55289 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.94□□□□□ -1.46
CDH12P55289 AC010132.4-201ENST00000569883 1368 ntBASIC5.93□□□□□ -1.46
CDH12P55289 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CDH12P55289 AP000547.3-204ENST00000588548 2523 ntBASIC5.93□□□□□ -1.46
CDH12P55289 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH12P55289 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH12P55289 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CDH12P55289 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CDH12P55289 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
CDH12P55289 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH12P55289 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CDH12P55289 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CDH12P55289 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CDH12P55289 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CDH12P55289 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CDH12P55289 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH12P55289 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CDH12P55289 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.93□□□□□ -1.46
CDH12P55289 MRPL32P1-201ENST00000406301 247 ntBASIC5.93□□□□□ -1.46
CDH12P55289 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.93□□□□□ -1.46
CDH12P55289 ELOBP4-201ENST00000423418 296 ntBASIC5.93□□□□□ -1.46
CDH12P55289 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.93□□□□□ -1.46
CDH12P55289 FAR1P1-201ENST00000427163 934 ntBASIC5.93□□□□□ -1.46
CDH12P55289 AL596268.1-201ENST00000427910 1048 ntBASIC5.93□□□□□ -1.46
CDH12P55289 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CDH12P55289 OR13K1P-201ENST00000444577 975 ntBASIC5.93□□□□□ -1.46
CDH12P55289 AL022237.1-201ENST00000446663 358 ntBASIC5.93□□□□□ -1.46
CDH12P55289 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDH12P55289 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH12P55289 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH12P55289 AL133480.2-201ENST00000456723 487 ntBASIC5.93□□□□□ -1.46
CDH12P55289 RN7SL221P-201ENST00000466190 281 ntBASIC5.93□□□□□ -1.46
CDH12P55289 SLC25A51P1-201ENST00000468432 871 ntBASIC5.93□□□□□ -1.46
CDH12P55289 RPL19P11-201ENST00000495944 589 ntBASIC5.93□□□□□ -1.46
CDH12P55289 ATG10-AS1-201ENST00000504846 648 ntBASIC5.93□□□□□ -1.46
CDH12P55289 RN7SKP67-201ENST00000515905 235 ntBASIC5.93□□□□□ -1.46
CDH12P55289 RN7SKP196-201ENST00000516267 345 ntBASIC5.93□□□□□ -1.46
CDH12P55289 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH12P55289 IGKV1D-22-201ENST00000518953 324 ntBASIC5.93□□□□□ -1.46
CDH12P55289 AC104997.1-201ENST00000519761 717 ntBASIC5.93□□□□□ -1.46
CDH12P55289 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.93□□□□□ -1.46
CDH12P55289 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.93□□□□□ -1.46
CDH12P55289 OR4A40P-201ENST00000533878 948 ntBASIC5.93□□□□□ -1.46
CDH12P55289 LDHC-204ENST00000536880 957 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH12P55289 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.93□□□□□ -1.46
CDH12P55289 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.93□□□□□ -1.46
CDH12P55289 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.93□□□□□ -1.46
CDH12P55289 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.93□□□□□ -1.46
CDH12P55289 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC5.93□□□□□ -1.46
CDH12P55289 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC5.93□□□□□ -1.46
CDH12P55289 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH12P55289 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.93□□□□□ -1.46
CDH12P55289 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms