Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.63□□□□□ -1.35
LHX1P48742 AC130360.1-201ENST00000425489 1117 ntBASIC6.63□□□□□ -1.35
LHX1P48742 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.63□□□□□ -1.35
LHX1P48742 AC069154.1-201ENST00000432914 542 ntBASIC6.63□□□□□ -1.35
LHX1P48742 AC016908.1-201ENST00000442571 1219 ntBASIC6.63□□□□□ -1.35
LHX1P48742 RPL6P30-201ENST00000443382 862 ntBASIC6.63□□□□□ -1.35
LHX1P48742 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.63□□□□□ -1.35
LHX1P48742 AC068522.1-201ENST00000482895 345 ntBASIC6.63□□□□□ -1.35
LHX1P48742 Y_RNA.710-201ENST00000516975 110 ntBASIC6.63□□□□□ -1.35
LHX1P48742 RNA5SP400-201ENST00000517155 111 ntBASIC6.63□□□□□ -1.35
LHX1P48742 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.63□□□□□ -1.35
LHX1P48742 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.63□□□□□ -1.35
LHX1P48742 AC130365.2-201ENST00000525882 1201 ntBASIC6.63□□□□□ -1.35
LHX1P48742 EIF4EP5-201ENST00000528228 640 ntBASIC6.63□□□□□ -1.35
LHX1P48742 RPA2P3-201ENST00000533268 770 ntBASIC6.63□□□□□ -1.35
LHX1P48742 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.63□□□□□ -1.35
LHX1P48742 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.63□□□□□ -1.35
LHX1P48742 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC6.63□□□□□ -1.35
LHX1P48742 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.63□□□□□ -1.35
LHX1P48742 AC092332.1-201ENST00000563684 829 ntBASIC6.63□□□□□ -1.35
LHX1P48742 GLYATL1P2-202ENST00000588046 902 ntBASIC6.63□□□□□ -1.35
LHX1P48742 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.63□□□□□ -1.35
LHX1P48742 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.63□□□□□ -1.35
LHX1P48742 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC6.63□□□□□ -1.35
LHX1P48742 AL499605.1-201ENST00000604628 403 ntBASIC6.63□□□□□ -1.35
LHX1P48742 AP002345.2-201ENST00000609961 904 ntBASIC6.63□□□□□ -1.35
LHX1P48742 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.63□□□□□ -1.35
LHX1P48742 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.63□□□□□ -1.35
LHX1P48742 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.63□□□□□ -1.35
LHX1P48742 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
LHX1P48742 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.63□□□□□ -1.35
LHX1P48742 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LHX1P48742 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
LHX1P48742 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
LHX1P48742 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LHX1P48742 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.63□□□□□ -1.35
LHX1P48742 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
LHX1P48742 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LHX1P48742 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
LHX1P48742 AC105749.1-201ENST00000631338 2008 ntBASIC6.62□□□□□ -1.35
LHX1P48742 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LHX1P48742 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
LHX1P48742 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
LHX1P48742 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.62□□□□□ -1.35
LHX1P48742 AC011369.2-201ENST00000624423 1567 ntBASIC6.62□□□□□ -1.35
LHX1P48742 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LHX1P48742 AC022507.1-201ENST00000548349 1505 ntBASIC6.62□□□□□ -1.35
LHX1P48742 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LHX1P48742 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LHX1P48742 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.62□□□□□ -1.35
LHX1P48742 AC119674.1-213ENST00000641177 1386 ntBASIC6.62□□□□□ -1.35
LHX1P48742 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.62□□□□□ -1.35
LHX1P48742 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LHX1P48742 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.62□□□□□ -1.35
LHX1P48742 SNORA21-201ENST00000362423 132 ntBASIC6.62□□□□□ -1.35
LHX1P48742 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.62□□□□□ -1.35
LHX1P48742 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.62□□□□□ -1.35
LHX1P48742 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC6.62□□□□□ -1.35
LHX1P48742 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.62□□□□□ -1.35
LHX1P48742 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.62□□□□□ -1.35
LHX1P48742 PNKDP1-201ENST00000435914 430 ntBASIC6.62□□□□□ -1.35
LHX1P48742 PPIAP7-201ENST00000454070 489 ntBASIC6.62□□□□□ -1.35
LHX1P48742 AP002884.1-201ENST00000479691 655 ntBASIC6.62□□□□□ -1.35
LHX1P48742 PFN1P8-201ENST00000497012 543 ntBASIC6.62□□□□□ -1.35
LHX1P48742 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.62□□□□□ -1.35
LHX1P48742 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC6.62□□□□□ -1.35
LHX1P48742 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.62□□□□□ -1.35
LHX1P48742 AP000620.1-201ENST00000527147 504 ntBASIC6.62□□□□□ -1.35
LHX1P48742 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.62□□□□□ -1.35
LHX1P48742 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.62□□□□□ -1.35
LHX1P48742 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.62□□□□□ -1.35
LHX1P48742 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LHX1P48742 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.62□□□□□ -1.35
LHX1P48742 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.62□□□□□ -1.35
LHX1P48742 AC091167.5-201ENST00000605689 894 ntBASIC6.62□□□□□ -1.35
LHX1P48742 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.62□□□□□ -1.35
LHX1P48742 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.62□□□□□ -1.35
LHX1P48742 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.62□□□□□ -1.35
LHX1P48742 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.62□□□□□ -1.35
LHX1P48742 MARK2P4-201ENST00000503381 2380 ntBASIC6.62□□□□□ -1.35
LHX1P48742 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LHX1P48742 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LHX1P48742 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
LHX1P48742 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LHX1P48742 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
LHX1P48742 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
LHX1P48742 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LHX1P48742 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LHX1P48742 AC062029.1-202ENST00000606164 3651 ntBASIC6.62□□□□□ -1.35
LHX1P48742 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LHX1P48742 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
LHX1P48742 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
LHX1P48742 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.61□□□□□ -1.35
LHX1P48742 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
LHX1P48742 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.61□□□□□ -1.35
LHX1P48742 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
LHX1P48742 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
LHX1P48742 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
LHX1P48742 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
LHX1P48742 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms