Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SLC1A1P43005 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SLC1A1P43005 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SLC1A1P43005 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
SLC1A1P43005 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SLC1A1P43005 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
SLC1A1P43005 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
SLC1A1P43005 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.49□□□□□ -1.37
SLC1A1P43005 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SLC1A1P43005 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SLC1A1P43005 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SLC1A1P43005 AL731532.1-201ENST00000623972 4236 ntBASIC6.49□□□□□ -1.37
SLC1A1P43005 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SLC1A1P43005 SNORD1C-201ENST00000363315 78 ntBASIC6.49□□□□□ -1.37
SLC1A1P43005 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SLC1A1P43005 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SLC1A1P43005 AL096800.1-201ENST00000405326 893 ntBASIC6.49□□□□□ -1.37
SLC1A1P43005 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.49□□□□□ -1.37
SLC1A1P43005 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.49□□□□□ -1.37
SLC1A1P43005 AC112492.2-201ENST00000432774 1030 ntBASIC6.49□□□□□ -1.37
SLC1A1P43005 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.49□□□□□ -1.37
SLC1A1P43005 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.49□□□□□ -1.37
SLC1A1P43005 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.49□□□□□ -1.37
SLC1A1P43005 AC135983.3-201ENST00000528049 1226 ntBASIC6.49□□□□□ -1.37
SLC1A1P43005 AC124891.1-201ENST00000536322 519 ntBASIC6.49□□□□□ -1.37
SLC1A1P43005 AC025283.1-201ENST00000572039 734 ntBASIC6.49□□□□□ -1.37
SLC1A1P43005 MIR4732-201ENST00000581873 76 ntBASIC6.49□□□□□ -1.37
SLC1A1P43005 AL137067.2-201ENST00000621202 131 ntBASIC6.49□□□□□ -1.37
SLC1A1P43005 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.49□□□□□ -1.37
SLC1A1P43005 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.49□□□□□ -1.37
SLC1A1P43005 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
SLC1A1P43005 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SLC1A1P43005 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.49□□□□□ -1.37
SLC1A1P43005 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.49□□□□□ -1.37
SLC1A1P43005 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SLC1A1P43005 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.49□□□□□ -1.37
SLC1A1P43005 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SLC1A1P43005 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SLC1A1P43005 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SLC1A1P43005 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SLC1A1P43005 AC024651.2-201ENST00000562480 2098 ntBASIC6.48□□□□□ -1.37
SLC1A1P43005 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SLC1A1P43005 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SLC1A1P43005 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.48□□□□□ -1.37
SLC1A1P43005 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.48□□□□□ -1.37
SLC1A1P43005 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
SLC1A1P43005 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SLC1A1P43005 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SLC1A1P43005 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SLC1A1P43005 RNA5SP485-201ENST00000365053 119 ntBASIC6.48□□□□□ -1.37
SLC1A1P43005 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.48□□□□□ -1.37
SLC1A1P43005 AL365220.1-201ENST00000432923 399 ntBASIC6.48□□□□□ -1.37
SLC1A1P43005 AL731534.1-201ENST00000434711 269 ntBASIC6.48□□□□□ -1.37
SLC1A1P43005 AC128677.1-201ENST00000436016 442 ntBASIC6.48□□□□□ -1.37
SLC1A1P43005 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.48□□□□□ -1.37
SLC1A1P43005 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.48□□□□□ -1.37
SLC1A1P43005 RN7SL352P-201ENST00000466002 277 ntBASIC6.48□□□□□ -1.37
SLC1A1P43005 RN7SL502P-201ENST00000481857 290 ntBASIC6.48□□□□□ -1.37
SLC1A1P43005 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SLC1A1P43005 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SLC1A1P43005 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.48□□□□□ -1.37
SLC1A1P43005 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.48□□□□□ -1.37
SLC1A1P43005 AC122714.1-201ENST00000502510 459 ntBASIC6.48□□□□□ -1.37
SLC1A1P43005 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.48□□□□□ -1.37
SLC1A1P43005 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.48□□□□□ -1.37
SLC1A1P43005 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.48□□□□□ -1.37
SLC1A1P43005 AC023310.2-201ENST00000553844 547 ntBASIC6.48□□□□□ -1.37
SLC1A1P43005 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.48□□□□□ -1.37
SLC1A1P43005 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
SLC1A1P43005 AL390877.1-201ENST00000605704 214 ntBASIC6.48□□□□□ -1.37
SLC1A1P43005 AC068726.1-201ENST00000610993 341 ntBASIC6.48□□□□□ -1.37
SLC1A1P43005 MIR6883-201ENST00000614952 78 ntBASIC6.48□□□□□ -1.37
SLC1A1P43005 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SLC1A1P43005 MIR6811-201ENST00000620409 58 ntBASIC6.48□□□□□ -1.37
SLC1A1P43005 AC069234.4-201ENST00000621276 412 ntBASIC6.48□□□□□ -1.37
SLC1A1P43005 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SLC1A1P43005 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SLC1A1P43005 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.48□□□□□ -1.37
SLC1A1P43005 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.48□□□□□ -1.37
SLC1A1P43005 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SLC1A1P43005 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
SLC1A1P43005 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SLC1A1P43005 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SLC1A1P43005 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
SLC1A1P43005 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SLC1A1P43005 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
SLC1A1P43005 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
SLC1A1P43005 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SLC1A1P43005 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
SLC1A1P43005 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
SLC1A1P43005 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.47□□□□□ -1.37
SLC1A1P43005 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
SLC1A1P43005 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.47□□□□□ -1.37
SLC1A1P43005 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SLC1A1P43005 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SLC1A1P43005 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SLC1A1P43005 ARSFP1-201ENST00000398758 477 ntBASIC6.47□□□□□ -1.37
SLC1A1P43005 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.47□□□□□ -1.37
SLC1A1P43005 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.47□□□□□ -1.37
SLC1A1P43005 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms