Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CIITAP33076 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
CIITAP33076 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.09□□□□□ -1.27
CIITAP33076 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
CIITAP33076 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.09□□□□□ -1.27
CIITAP33076 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
CIITAP33076 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.09□□□□□ -1.27
CIITAP33076 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.09□□□□□ -1.27
CIITAP33076 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.09□□□□□ -1.27
CIITAP33076 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.09□□□□□ -1.27
CIITAP33076 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
CIITAP33076 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
CIITAP33076 RNU1-65P-201ENST00000363919 148 ntBASIC7.09□□□□□ -1.27
CIITAP33076 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
CIITAP33076 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
CIITAP33076 AL445238.1-204ENST00000400311 463 ntBASIC7.09□□□□□ -1.27
CIITAP33076 AC012497.1-201ENST00000429392 575 ntBASIC7.09□□□□□ -1.27
CIITAP33076 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.09□□□□□ -1.27
CIITAP33076 AC010240.2-201ENST00000445363 1205 ntBASIC7.09□□□□□ -1.27
CIITAP33076 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7.09□□□□□ -1.27
CIITAP33076 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CIITAP33076 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.09□□□□□ -1.27
CIITAP33076 SNX18P24-201ENST00000505249 671 ntBASIC7.09□□□□□ -1.27
CIITAP33076 AC122718.2-201ENST00000505325 591 ntBASIC7.09□□□□□ -1.27
CIITAP33076 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.09□□□□□ -1.27
CIITAP33076 AC108103.1-201ENST00000511286 446 ntBASIC7.09□□□□□ -1.27
CIITAP33076 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC7.09□□□□□ -1.27
CIITAP33076 RNA5SP434-201ENST00000516647 121 ntBASIC7.09□□□□□ -1.27
CIITAP33076 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC7.09□□□□□ -1.27
CIITAP33076 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC7.09□□□□□ -1.27
CIITAP33076 NPIPB14P-203ENST00000532298 987 ntBASIC7.09□□□□□ -1.27
CIITAP33076 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.09□□□□□ -1.27
CIITAP33076 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC7.09□□□□□ -1.27
CIITAP33076 AC026826.3-201ENST00000561747 158 ntBASIC7.09□□□□□ -1.27
CIITAP33076 MIR4301-201ENST00000577203 66 ntBASIC7.09□□□□□ -1.27
CIITAP33076 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC7.09□□□□□ -1.27
CIITAP33076 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.09□□□□□ -1.27
CIITAP33076 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC7.09□□□□□ -1.27
CIITAP33076 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.09□□□□□ -1.27
CIITAP33076 AP001823.1-201ENST00000604056 1003 ntBASIC7.09□□□□□ -1.27
CIITAP33076 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC7.09□□□□□ -1.27
CIITAP33076 MIR7109-201ENST00000613748 65 ntBASIC7.09□□□□□ -1.27
CIITAP33076 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC7.09□□□□□ -1.27
CIITAP33076 AC073488.6-201ENST00000632293 754 ntBASIC7.09□□□□□ -1.27
CIITAP33076 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CIITAP33076 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
CIITAP33076 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
CIITAP33076 AC005034.3-201ENST00000604845 1747 ntBASIC7.09□□□□□ -1.27
CIITAP33076 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CIITAP33076 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CIITAP33076 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.28
CIITAP33076 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
CIITAP33076 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC7.08□□□□□ -1.28
CIITAP33076 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CIITAP33076 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.08□□□□□ -1.28
CIITAP33076 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.08□□□□□ -1.28
CIITAP33076 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
CIITAP33076 AC018717.1-201ENST00000457712 1505 ntBASIC7.08□□□□□ -1.28
CIITAP33076 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CIITAP33076 RNA5SP110-201ENST00000362638 115 ntBASIC7.08□□□□□ -1.28
CIITAP33076 RNU11-6P-201ENST00000391127 133 ntBASIC7.08□□□□□ -1.28
CIITAP33076 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
CIITAP33076 RN7SKP161-201ENST00000411110 305 ntBASIC7.08□□□□□ -1.28
CIITAP33076 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC7.08□□□□□ -1.28
CIITAP33076 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.08□□□□□ -1.28
CIITAP33076 AL354707.3-201ENST00000427308 331 ntBASIC7.08□□□□□ -1.28
CIITAP33076 IGLV3-4-201ENST00000432300 244 ntBASIC7.08□□□□□ -1.28
CIITAP33076 HMGB1P7-201ENST00000450921 612 ntBASIC7.08□□□□□ -1.28
CIITAP33076 RANP2-201ENST00000456833 229 ntBASIC7.08□□□□□ -1.28
CIITAP33076 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC7.08□□□□□ -1.28
CIITAP33076 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.08□□□□□ -1.28
CIITAP33076 OR7E99P-201ENST00000505750 922 ntBASIC7.08□□□□□ -1.28
CIITAP33076 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC7.08□□□□□ -1.28
CIITAP33076 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.08□□□□□ -1.28
CIITAP33076 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC7.08□□□□□ -1.28
CIITAP33076 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC7.08□□□□□ -1.28
CIITAP33076 OR51A1P-201ENST00000511110 946 ntBASIC7.08□□□□□ -1.28
CIITAP33076 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.08□□□□□ -1.28
CIITAP33076 AP005639.1-201ENST00000526939 192 ntBASIC7.08□□□□□ -1.28
CIITAP33076 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC7.08□□□□□ -1.28
CIITAP33076 RPA2P3-201ENST00000533268 770 ntBASIC7.08□□□□□ -1.28
CIITAP33076 AC084121.1-201ENST00000533882 835 ntBASIC7.08□□□□□ -1.28
CIITAP33076 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.08□□□□□ -1.28
CIITAP33076 AC027229.1-201ENST00000583887 253 ntBASIC7.08□□□□□ -1.28
CIITAP33076 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.08□□□□□ -1.28
CIITAP33076 GLYATL1P2-202ENST00000588046 902 ntBASIC7.08□□□□□ -1.28
CIITAP33076 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC7.08□□□□□ -1.28
CIITAP33076 AC024589.2-201ENST00000605642 1294 ntBASIC7.08□□□□□ -1.28
CIITAP33076 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC7.08□□□□□ -1.28
CIITAP33076 AC079414.3-201ENST00000612986 1090 ntBASIC7.08□□□□□ -1.28
CIITAP33076 AC006213.4-201ENST00000616184 634 ntBASIC7.08□□□□□ -1.28
CIITAP33076 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.08□□□□□ -1.28
CIITAP33076 IPO5-229ENST00000631030 192 ntTSL 5 BASIC7.08□□□□□ -1.28
CIITAP33076 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CIITAP33076 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CIITAP33076 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
CIITAP33076 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.08□□□□□ -1.28
CIITAP33076 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
CIITAP33076 AC092692.1-201ENST00000623625 2595 ntBASIC7.08□□□□□ -1.28
CIITAP33076 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms