Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC008691.1-209ENST00000642094 814 ntBASIC6.4□□□□□ -1.38
HMGA1P17096 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
HMGA1P17096 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
HMGA1P17096 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HMGA1P17096 CDY5P-201ENST00000411487 1580 ntBASIC6.4□□□□□ -1.39
HMGA1P17096 CDY9P-201ENST00000451397 1580 ntBASIC6.4□□□□□ -1.39
HMGA1P17096 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HMGA1P17096 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC6.39□□□□□ -1.39
HMGA1P17096 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HMGA1P17096 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HMGA1P17096 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.39□□□□□ -1.39
HMGA1P17096 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HMGA1P17096 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
HMGA1P17096 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.39□□□□□ -1.39
HMGA1P17096 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HMGA1P17096 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HMGA1P17096 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
HMGA1P17096 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
HMGA1P17096 RNA5SP435-201ENST00000364044 108 ntBASIC6.39□□□□□ -1.39
HMGA1P17096 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
HMGA1P17096 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.39□□□□□ -1.39
HMGA1P17096 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.39□□□□□ -1.39
HMGA1P17096 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.39□□□□□ -1.39
HMGA1P17096 RPL23AP19-201ENST00000436229 369 ntBASIC6.39□□□□□ -1.39
HMGA1P17096 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.39□□□□□ -1.39
HMGA1P17096 AC092865.4-201ENST00000477936 615 ntBASIC6.39□□□□□ -1.39
HMGA1P17096 PSMA2P2-201ENST00000504319 686 ntBASIC6.39□□□□□ -1.39
HMGA1P17096 AC114781.3-201ENST00000512083 142 ntBASIC6.39□□□□□ -1.39
HMGA1P17096 RNA5SP400-201ENST00000517155 111 ntBASIC6.39□□□□□ -1.39
HMGA1P17096 IGLVIV-64-201ENST00000518581 301 ntBASIC6.39□□□□□ -1.39
HMGA1P17096 AC022826.1-201ENST00000519383 805 ntBASIC6.39□□□□□ -1.39
HMGA1P17096 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HMGA1P17096 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.39□□□□□ -1.39
HMGA1P17096 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.39□□□□□ -1.39
HMGA1P17096 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.39□□□□□ -1.39
HMGA1P17096 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.39□□□□□ -1.39
HMGA1P17096 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.39□□□□□ -1.39
HMGA1P17096 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.39□□□□□ -1.39
HMGA1P17096 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HMGA1P17096 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HMGA1P17096 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HMGA1P17096 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HMGA1P17096 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC6.39□□□□□ -1.39
HMGA1P17096 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.39□□□□□ -1.39
HMGA1P17096 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
HMGA1P17096 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.39□□□□□ -1.39
HMGA1P17096 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.38□□□□□ -1.39
HMGA1P17096 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HMGA1P17096 AC022819.1-201ENST00000563495 3910 ntBASIC6.38□□□□□ -1.39
HMGA1P17096 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HMGA1P17096 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HMGA1P17096 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGA1P17096 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.38□□□□□ -1.39
HMGA1P17096 RNU1-150P-201ENST00000362491 162 ntBASIC6.38□□□□□ -1.39
HMGA1P17096 RNA5SP333-201ENST00000363466 118 ntBASIC6.38□□□□□ -1.39
HMGA1P17096 RNU105B-201ENST00000364478 208 ntBASIC6.38□□□□□ -1.39
HMGA1P17096 RN7SKP78-201ENST00000364711 318 ntBASIC6.38□□□□□ -1.39
HMGA1P17096 RNA5SP334-201ENST00000364825 118 ntBASIC6.38□□□□□ -1.39
HMGA1P17096 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGA1P17096 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGA1P17096 AL031985.1-201ENST00000392713 418 ntBASIC6.38□□□□□ -1.39
HMGA1P17096 CDY17P-201ENST00000414121 1282 ntBASIC6.38□□□□□ -1.39
HMGA1P17096 RPS15AP30-201ENST00000420976 390 ntBASIC6.38□□□□□ -1.39
HMGA1P17096 RPL12P12-201ENST00000424633 501 ntBASIC6.38□□□□□ -1.39
HMGA1P17096 FABP5P2-201ENST00000439042 408 ntBASIC6.38□□□□□ -1.39
HMGA1P17096 AL445466.1-201ENST00000448432 357 ntBASIC6.38□□□□□ -1.39
HMGA1P17096 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.38□□□□□ -1.39
HMGA1P17096 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.38□□□□□ -1.39
HMGA1P17096 RN7SL269P-201ENST00000467795 305 ntBASIC6.38□□□□□ -1.39
HMGA1P17096 RPL7P51-201ENST00000490532 749 ntBASIC6.38□□□□□ -1.39
HMGA1P17096 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HMGA1P17096 SNORD46.2-201ENST00000516021 102 ntBASIC6.38□□□□□ -1.39
HMGA1P17096 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.38□□□□□ -1.39
HMGA1P17096 OR6M2P-201ENST00000529831 871 ntBASIC6.38□□□□□ -1.39
HMGA1P17096 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.38□□□□□ -1.39
HMGA1P17096 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.38□□□□□ -1.39
HMGA1P17096 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC6.38□□□□□ -1.39
HMGA1P17096 AC008521.2-201ENST00000591021 259 ntBASIC6.38□□□□□ -1.39
HMGA1P17096 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
HMGA1P17096 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.38□□□□□ -1.39
HMGA1P17096 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.38□□□□□ -1.39
HMGA1P17096 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGA1P17096 AL031651.1-201ENST00000615357 1438 ntBASIC6.38□□□□□ -1.39
HMGA1P17096 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.38□□□□□ -1.39
HMGA1P17096 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.38□□□□□ -1.39
HMGA1P17096 AC011369.2-201ENST00000624423 1567 ntBASIC6.38□□□□□ -1.39
HMGA1P17096 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HMGA1P17096 CAST-222ENST00000508579 1758 ntTSL 2 BASIC6.38□□□□□ -1.39
HMGA1P17096 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGA1P17096 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGA1P17096 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
HMGA1P17096 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.38□□□□□ -1.39
HMGA1P17096 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGA1P17096 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGA1P17096 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGA1P17096 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGA1P17096 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
HMGA1P17096 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HMGA1P17096 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
HMGA1P17096 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms