Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 BRWD1P3-201ENST00000428816 390 ntBASIC6.92□□□□□ -1.3
COL11A1P12107 BX119321.1-201ENST00000428912 797 ntBASIC6.92□□□□□ -1.3
COL11A1P12107 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.92□□□□□ -1.3
COL11A1P12107 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.92□□□□□ -1.3
COL11A1P12107 AC002504.1-201ENST00000438281 691 ntBASIC6.92□□□□□ -1.3
COL11A1P12107 RPSAP37-201ENST00000470913 821 ntBASIC6.92□□□□□ -1.3
COL11A1P12107 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.92□□□□□ -1.3
COL11A1P12107 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.92□□□□□ -1.3
COL11A1P12107 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.92□□□□□ -1.3
COL11A1P12107 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.92□□□□□ -1.3
COL11A1P12107 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL11A1P12107 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.92□□□□□ -1.3
COL11A1P12107 MIR6729-201ENST00000618194 65 ntBASIC6.92□□□□□ -1.3
COL11A1P12107 AC245014.3-201ENST00000618589 347 ntBASIC6.92□□□□□ -1.3
COL11A1P12107 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.92□□□□□ -1.3
COL11A1P12107 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.92□□□□□ -1.3
COL11A1P12107 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL11A1P12107 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.91□□□□□ -1.3
COL11A1P12107 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.91□□□□□ -1.3
COL11A1P12107 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL11A1P12107 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.91□□□□□ -1.3
COL11A1P12107 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.91□□□□□ -1.3
COL11A1P12107 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL11A1P12107 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL11A1P12107 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL11A1P12107 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
COL11A1P12107 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
COL11A1P12107 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
COL11A1P12107 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.91□□□□□ -1.3
COL11A1P12107 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.91□□□□□ -1.3
COL11A1P12107 BZW1P1-201ENST00000454901 1240 ntBASIC6.91□□□□□ -1.3
COL11A1P12107 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.91□□□□□ -1.3
COL11A1P12107 GAPDHP71-201ENST00000511530 1003 ntBASIC6.91□□□□□ -1.3
COL11A1P12107 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.91□□□□□ -1.3
COL11A1P12107 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.91□□□□□ -1.3
COL11A1P12107 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.91□□□□□ -1.3
COL11A1P12107 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.91□□□□□ -1.3
COL11A1P12107 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.91□□□□□ -1.3
COL11A1P12107 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.91□□□□□ -1.3
COL11A1P12107 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
COL11A1P12107 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.91□□□□□ -1.3
COL11A1P12107 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
COL11A1P12107 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
COL11A1P12107 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.91□□□□□ -1.3
COL11A1P12107 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC6.91□□□□□ -1.3
COL11A1P12107 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL11A1P12107 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL11A1P12107 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL11A1P12107 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL11A1P12107 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL11A1P12107 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL11A1P12107 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.9□□□□□ -1.3
COL11A1P12107 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
COL11A1P12107 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC6.9□□□□□ -1.3
COL11A1P12107 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL11A1P12107 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.9□□□□□ -1.3
COL11A1P12107 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
COL11A1P12107 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
COL11A1P12107 RNA5SP46-201ENST00000362370 120 ntBASIC6.9□□□□□ -1.3
COL11A1P12107 OR7E101P-201ENST00000400428 513 ntBASIC6.9□□□□□ -1.3
COL11A1P12107 RN7SKP166-201ENST00000410812 305 ntBASIC6.9□□□□□ -1.3
COL11A1P12107 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.9□□□□□ -1.3
COL11A1P12107 AC093155.2-201ENST00000420734 937 ntBASIC6.9□□□□□ -1.3
COL11A1P12107 RPS15AP30-201ENST00000420976 390 ntBASIC6.9□□□□□ -1.3
COL11A1P12107 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.9□□□□□ -1.3
COL11A1P12107 AC008945.1-201ENST00000505144 499 ntBASIC6.9□□□□□ -1.3
COL11A1P12107 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.9□□□□□ -1.3
COL11A1P12107 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.9□□□□□ -1.3
COL11A1P12107 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.9□□□□□ -1.3
COL11A1P12107 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL11A1P12107 SNORD95-201ENST00000579879 68 ntBASIC6.9□□□□□ -1.3
COL11A1P12107 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
COL11A1P12107 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL11A1P12107 AL359091.1-201ENST00000449048 1734 ntBASIC6.9□□□□□ -1.31
COL11A1P12107 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
COL11A1P12107 AC112243.1-201ENST00000623949 3851 ntBASIC6.9□□□□□ -1.31
COL11A1P12107 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
COL11A1P12107 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
COL11A1P12107 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
COL11A1P12107 AC245096.1-201ENST00000413104 546 ntBASIC6.9□□□□□ -1.31
COL11A1P12107 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.9□□□□□ -1.31
COL11A1P12107 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.9□□□□□ -1.31
COL11A1P12107 BMS1P17-202ENST00000416720 316 ntBASIC6.9□□□□□ -1.31
COL11A1P12107 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.9□□□□□ -1.31
COL11A1P12107 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC6.9□□□□□ -1.31
COL11A1P12107 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
COL11A1P12107 AC008629.2-201ENST00000503783 483 ntBASIC6.9□□□□□ -1.31
COL11A1P12107 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.9□□□□□ -1.31
COL11A1P12107 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
COL11A1P12107 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.9□□□□□ -1.31
COL11A1P12107 OR4A40P-201ENST00000533878 948 ntBASIC6.9□□□□□ -1.31
COL11A1P12107 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.9□□□□□ -1.31
COL11A1P12107 AL136131.3-201ENST00000607600 188 ntBASIC6.9□□□□□ -1.31
COL11A1P12107 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.9□□□□□ -1.31
COL11A1P12107 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.89□□□□□ -1.31
COL11A1P12107 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
COL11A1P12107 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL11A1P12107 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC6.89□□□□□ -1.31
COL11A1P12107 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.89□□□□□ -1.31
COL11A1P12107 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms