Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC5.52□□□□□ -1.53
UBCP0CG48 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC5.52□□□□□ -1.53
UBCP0CG48 SYPL1P2-201ENST00000582878 727 ntBASIC5.52□□□□□ -1.53
UBCP0CG48 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.52□□□□□ -1.53
UBCP0CG48 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
UBCP0CG48 AC125494.2-201ENST00000602431 657 ntBASIC5.52□□□□□ -1.53
UBCP0CG48 MIR7159-201ENST00000620587 66 ntBASIC5.52□□□□□ -1.53
UBCP0CG48 AP003108.4-201ENST00000623917 878 ntBASIC5.52□□□□□ -1.53
UBCP0CG48 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.52□□□□□ -1.53
UBCP0CG48 AC003992.1-201ENST00000635364 557 ntBASIC5.52□□□□□ -1.53
UBCP0CG48 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
UBCP0CG48 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
UBCP0CG48 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.52□□□□□ -1.53
UBCP0CG48 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.52□□□□□ -1.53
UBCP0CG48 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
UBCP0CG48 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
UBCP0CG48 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
UBCP0CG48 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
UBCP0CG48 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
UBCP0CG48 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
UBCP0CG48 GTF2IP4-201ENST00000453092 2054 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 CDY11P-201ENST00000447168 1651 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
UBCP0CG48 AC087516.1-201ENST00000561236 2428 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
UBCP0CG48 AL080312.1-201ENST00000256654 824 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
UBCP0CG48 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
UBCP0CG48 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
UBCP0CG48 AL121835.1-201ENST00000404250 354 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC5.51□□□□□ -1.53
UBCP0CG48 RN7SKP151-201ENST00000410230 316 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 RN7SKP281-201ENST00000410472 352 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 RN7SKP17-201ENST00000411242 351 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.51□□□□□ -1.53
UBCP0CG48 PTPN2P1-201ENST00000423212 1072 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 AL138479.1-201ENST00000426913 484 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 E2F6P1-201ENST00000428850 745 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 RPL5P2-201ENST00000429598 854 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 AC092106.2-201ENST00000436597 487 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC5.51□□□□□ -1.53
UBCP0CG48 E2F6P3-201ENST00000441743 743 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.51□□□□□ -1.53
UBCP0CG48 AL356133.1-201ENST00000444762 372 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 AL020997.1-201ENST00000446554 349 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.51□□□□□ -1.53
UBCP0CG48 RBMY2EP-202ENST00000456360 940 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 AC108751.3-201ENST00000461814 1020 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC5.51□□□□□ -1.53
UBCP0CG48 RPS3AP49-201ENST00000472161 790 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 OR9A1P-202ENST00000484361 945 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.51□□□□□ -1.53
UBCP0CG48 AC105391.1-201ENST00000503155 1045 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.51□□□□□ -1.53
UBCP0CG48 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.51□□□□□ -1.53
UBCP0CG48 AC093870.1-201ENST00000506837 213 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 GOLGA5P1-201ENST00000507317 980 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.51□□□□□ -1.53
UBCP0CG48 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC5.51□□□□□ -1.53
UBCP0CG48 AC009729.1-201ENST00000548873 1133 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.51□□□□□ -1.53
UBCP0CG48 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.51□□□□□ -1.53
UBCP0CG48 AC026956.1-201ENST00000558741 396 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC5.51□□□□□ -1.53
UBCP0CG48 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.51□□□□□ -1.53
UBCP0CG48 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.51□□□□□ -1.53
UBCP0CG48 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC5.51□□□□□ -1.53
UBCP0CG48 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.51□□□□□ -1.53
UBCP0CG48 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 LINC02495-203ENST00000636704 242 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
UBCP0CG48 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
UBCP0CG48 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
UBCP0CG48 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
UBCP0CG48 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.51□□□□□ -1.53
UBCP0CG48 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
UBCP0CG48 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
UBCP0CG48 AL353743.3-201ENST00000442109 1468 ntBASIC5.51□□□□□ -1.53
UBCP0CG48 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
UBCP0CG48 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
UBCP0CG48 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
UBCP0CG48 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
UBCP0CG48 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
UBCP0CG48 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
UBCP0CG48 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.5□□□□□ -1.53
UBCP0CG48 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
UBCP0CG48 AL355834.1-201ENST00000556602 3965 ntBASIC5.5□□□□□ -1.53
UBCP0CG48 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.5□□□□□ -1.53
UBCP0CG48 AC096921.2-201ENST00000561507 1916 ntBASIC5.5□□□□□ -1.53
UBCP0CG48 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
UBCP0CG48 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.5□□□□□ -1.53
UBCP0CG48 AC005702.3-201ENST00000585345 1447 ntBASIC5.5□□□□□ -1.53
UBCP0CG48 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
UBCP0CG48 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
UBCP0CG48 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.5□□□□□ -1.53
UBCP0CG48 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.5□□□□□ -1.53
UBCP0CG48 AC093671.1-201ENST00000624981 2929 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms