Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 RN7SL393P-201ENST00000463588 296 ntBASIC6.02□□□□□ -1.45
CLDN9O95484 AL355032.1-201ENST00000472981 438 ntBASIC6.02□□□□□ -1.45
CLDN9O95484 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.02□□□□□ -1.45
CLDN9O95484 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.02□□□□□ -1.45
CLDN9O95484 OR4D12P-201ENST00000509361 911 ntBASIC6.02□□□□□ -1.45
CLDN9O95484 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.02□□□□□ -1.45
CLDN9O95484 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.02□□□□□ -1.45
CLDN9O95484 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.02□□□□□ -1.45
CLDN9O95484 OR6M2P-201ENST00000529831 871 ntBASIC6.02□□□□□ -1.45
CLDN9O95484 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.02□□□□□ -1.45
CLDN9O95484 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.02□□□□□ -1.45
CLDN9O95484 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.02□□□□□ -1.45
CLDN9O95484 AC027334.1-201ENST00000603257 310 ntBASIC6.02□□□□□ -1.45
CLDN9O95484 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.02□□□□□ -1.45
CLDN9O95484 AC211486.4-201ENST00000621495 113 ntBASIC6.02□□□□□ -1.45
CLDN9O95484 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.02□□□□□ -1.45
CLDN9O95484 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLDN9O95484 AC079248.1-201ENST00000427568 1546 ntBASIC6.02□□□□□ -1.45
CLDN9O95484 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLDN9O95484 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLDN9O95484 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLDN9O95484 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.02□□□□□ -1.45
CLDN9O95484 RPS2P45-201ENST00000469997 2057 ntBASIC6.02□□□□□ -1.45
CLDN9O95484 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.01□□□□□ -1.45
CLDN9O95484 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLDN9O95484 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLDN9O95484 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLDN9O95484 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLDN9O95484 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLDN9O95484 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.01□□□□□ -1.45
CLDN9O95484 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.01□□□□□ -1.45
CLDN9O95484 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.01□□□□□ -1.45
CLDN9O95484 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
CLDN9O95484 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLDN9O95484 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
CLDN9O95484 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLDN9O95484 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLDN9O95484 SNORA43.1-201ENST00000364863 140 ntBASIC6.01□□□□□ -1.45
CLDN9O95484 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLDN9O95484 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.01□□□□□ -1.45
CLDN9O95484 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.01□□□□□ -1.45
CLDN9O95484 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.01□□□□□ -1.45
CLDN9O95484 RPS7P14-201ENST00000426405 583 ntBASIC6.01□□□□□ -1.45
CLDN9O95484 AC016027.5-201ENST00000427227 210 ntBASIC6.01□□□□□ -1.45
CLDN9O95484 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.01□□□□□ -1.45
CLDN9O95484 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLDN9O95484 AC112492.2-201ENST00000432774 1030 ntBASIC6.01□□□□□ -1.45
CLDN9O95484 AL022324.2-201ENST00000434827 780 ntBASIC6.01□□□□□ -1.45
CLDN9O95484 RPEP4-201ENST00000437636 602 ntBASIC6.01□□□□□ -1.45
CLDN9O95484 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.01□□□□□ -1.45
CLDN9O95484 AC112187.1-201ENST00000455837 479 ntBASIC6.01□□□□□ -1.45
CLDN9O95484 SLC25A51P1-201ENST00000468432 871 ntBASIC6.01□□□□□ -1.45
CLDN9O95484 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.01□□□□□ -1.45
CLDN9O95484 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
CLDN9O95484 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.01□□□□□ -1.45
CLDN9O95484 CYP4F27P-201ENST00000514557 494 ntBASIC6.01□□□□□ -1.45
CLDN9O95484 AC113191.1-201ENST00000517759 403 ntBASIC6.01□□□□□ -1.45
CLDN9O95484 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.01□□□□□ -1.45
CLDN9O95484 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.01□□□□□ -1.45
CLDN9O95484 AL589765.6-201ENST00000601909 549 ntBASIC6.01□□□□□ -1.45
CLDN9O95484 AC005479.3-201ENST00000602790 431 ntBASIC6.01□□□□□ -1.45
CLDN9O95484 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.01□□□□□ -1.45
CLDN9O95484 MIR6811-201ENST00000620409 58 ntBASIC6.01□□□□□ -1.45
CLDN9O95484 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CLDN9O95484 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CLDN9O95484 AP000547.3-204ENST00000588548 2523 ntBASIC6.01□□□□□ -1.45
CLDN9O95484 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.01□□□□□ -1.45
CLDN9O95484 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CLDN9O95484 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLDN9O95484 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CLDN9O95484 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.01□□□□□ -1.45
CLDN9O95484 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLDN9O95484 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CLDN9O95484 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CLDN9O95484 AP004289.1-201ENST00000436307 2205 ntBASIC6.01□□□□□ -1.45
CLDN9O95484 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLDN9O95484 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
CLDN9O95484 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLDN9O95484 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
CLDN9O95484 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6□□□□□ -1.45
CLDN9O95484 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLDN9O95484 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLDN9O95484 CASC19-246ENST00000641625 1606 ntBASIC6□□□□□ -1.45
CLDN9O95484 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6□□□□□ -1.45
CLDN9O95484 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
CLDN9O95484 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLDN9O95484 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLDN9O95484 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLDN9O95484 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLDN9O95484 RNU1-49P-201ENST00000363468 159 ntBASIC6□□□□□ -1.45
CLDN9O95484 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6□□□□□ -1.45
CLDN9O95484 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CLDN9O95484 SNORA70.9-201ENST00000384370 135 ntBASIC6□□□□□ -1.45
CLDN9O95484 AL121835.1-201ENST00000404250 354 ntBASIC6□□□□□ -1.45
CLDN9O95484 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6□□□□□ -1.45
CLDN9O95484 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6□□□□□ -1.45
CLDN9O95484 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6□□□□□ -1.45
CLDN9O95484 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6□□□□□ -1.45
CLDN9O95484 OSTCP4-201ENST00000424397 449 ntBASIC6□□□□□ -1.45
CLDN9O95484 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms