Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 OR9K2-201ENST00000305377 1122 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AMELX-201ENST00000348912 737 ntTSL 5 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 RN7SKP224-201ENST00000364140 325 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 LEMD1-202ENST00000367151 869 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 LEMD1-204ENST00000367153 929 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 RFKP1-201ENST00000400940 428 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 MTND2P12-201ENST00000417560 1252 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 HLA-DQB1-AS1-201ENST00000419852 552 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 HSPB1P1-201ENST00000423240 256 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AL731567.1-201ENST00000435635 462 ntTSL 2 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AC016908.1-201ENST00000442571 1219 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AC092447.7-202ENST00000443198 580 ntTSL 2 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AC073587.1-201ENST00000447093 876 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AC092967.1-201ENST00000449016 481 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AC096543.2-201ENST00000449140 859 ntTSL 3 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 RN7SL352P-201ENST00000466002 277 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 RN7SL379P-201ENST00000479912 293 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AL591122.1-201ENST00000487348 492 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 RN7SL209P-201ENST00000488309 276 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 RNA5SP360-201ENST00000516555 118 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 SSU72P6-201ENST00000532644 488 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AL358913.1-201ENST00000554342 121 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AL132712.1-201ENST00000555967 582 ntTSL 4 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AC027020.1-201ENST00000559349 632 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 NDUFA3P4-201ENST00000560814 250 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AL031846.1-201ENST00000560933 314 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AC010536.2-201ENST00000563036 338 ntTSL 3 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AC010320.1-201ENST00000599775 578 ntTSL 3 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AC124856.1-201ENST00000600819 896 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AC027334.1-201ENST00000603257 310 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AC111188.3-201ENST00000604663 307 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AC010680.5-201ENST00000605021 463 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AL008729.2-201ENST00000606393 473 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AC006335.3-201ENST00000613408 292 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AC005277.2-201ENST00000617898 390 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AC003992.1-201ENST00000635364 557 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AC104118.1-201ENST00000607625 1589 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 MEMO1-203ENST00000404530 1482 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.28□□□□□ -1.89
CHKB-CPT1BH3BT56 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
CHKB-CPT1BH3BT56 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CHKB-CPT1BH3BT56 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
CHKB-CPT1BH3BT56 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CHKB-CPT1BH3BT56 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CHKB-CPT1BH3BT56 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
CHKB-CPT1BH3BT56 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CHKB-CPT1BH3BT56 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CHKB-CPT1BH3BT56 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CHKB-CPT1BH3BT56 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CHKB-CPT1BH3BT56 MFSD1P1-201ENST00000576210 1327 ntBASIC3.27□□□□□ -1.89
CHKB-CPT1BH3BT56 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CHKB-CPT1BH3BT56 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CHKB-CPT1BH3BT56 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC3.27□□□□□ -1.89
CHKB-CPT1BH3BT56 AC091305.2-201ENST00000624049 1576 ntBASIC3.27□□□□□ -1.89
CHKB-CPT1BH3BT56 CA1-225ENST00000626824 2405 ntTSL 5 BASIC3.27□□□□□ -1.89
CHKB-CPT1BH3BT56 LIAS-201ENST00000261434 1258 ntTSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms