Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 AL136531.3-201ENST00000624378 3658 ntBASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 FO082842.1-201ENST00000423552 1370 ntBASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 AL033519.1-201ENST00000407266 307 ntBASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 Z84478.1-201ENST00000438230 1219 ntBASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 AL158053.1-201ENST00000441503 453 ntBASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 AL031681.1-201ENST00000443304 400 ntBASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 AL445991.1-201ENST00000450381 475 ntBASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 AC015908.1-201ENST00000478739 476 ntBASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 OR11I1P-201ENST00000486033 954 ntBASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 AC092349.1-201ENST00000504903 310 ntBASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 RN7SKP98-201ENST00000517070 156 ntBASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 DUX4L52-201ENST00000549363 777 ntBASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 DPPA3P2-201ENST00000553589 478 ntBASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 RN7SL270P-201ENST00000579643 281 ntBASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 ZNF92P2-201ENST00000600543 1059 ntBASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 MTCO2P22-201ENST00000603246 681 ntBASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 AL390877.1-201ENST00000605704 214 ntBASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 MIR6503-201ENST00000622884 86 ntBASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 AC007603.3-201ENST00000636915 979 ntBASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 CYP2G2P-201ENST00000594920 1485 ntBASIC7.48□□□□□ -1.21
COL4A3BPQ9Y5P4 AC132825.1-201ENST00000463573 2247 ntBASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 RAD1P1-201ENST00000231383 813 ntBASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 AL121977.1-201ENST00000401636 979 ntBASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 AL359885.1-201ENST00000415786 903 ntBASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 AL713922.1-201ENST00000416477 747 ntBASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 MTCYBP7-201ENST00000419540 1134 ntBASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 SNRPBP1-201ENST00000443634 282 ntBASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 AKR1D1P1-201ENST00000457236 936 ntBASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 RN7SL393P-201ENST00000463588 296 ntBASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 AC096754.1-201ENST00000508904 818 ntBASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 AC091849.1-201ENST00000509920 121 ntBASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 HMGN1P15-201ENST00000513870 295 ntBASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 AC113192.3-201ENST00000529152 742 ntBASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 BTG1P1-201ENST00000540396 508 ntBASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 NOP56P3-201ENST00000549457 385 ntBASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 HNRNPA1P74-201ENST00000560782 835 ntBASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms