Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC28BQ9BUN5 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 AC126474.2-201ENST00000623268 1750 ntBASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 TUBBP10-201ENST00000427668 1301 ntBASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 MIR187-201ENST00000385062 109 ntBASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 AL445238.1-204ENST00000400311 463 ntBASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 AC091492.1-201ENST00000419844 272 ntBASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 REREP1Y-201ENST00000422655 198 ntBASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 AHCYP8-201ENST00000425108 209 ntBASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 MTND1P10-201ENST00000426108 832 ntBASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 AC009303.1-201ENST00000426307 352 ntBASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 ATP5LP4-201ENST00000434169 307 ntBASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 PHBP4-201ENST00000437447 837 ntBASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 CR391992.1-201ENST00000438601 394 ntBASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 REREP2Y-201ENST00000439103 200 ntBASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 AC092421.1-201ENST00000448148 418 ntBASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 USP9YP2-201ENST00000504503 1000 ntBASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 AC025188.1-201ENST00000507514 600 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 ST13P12-201ENST00000508958 1094 ntBASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 USP9YP1-201ENST00000513521 1002 ntBASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 AC026956.1-201ENST00000558741 396 ntBASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 AC027229.1-201ENST00000583887 253 ntBASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 AC010487.1-201ENST00000594408 1172 ntBASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 AL035417.2-201ENST00000603887 796 ntBASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 AL137246.1-201ENST00000607072 977 ntBASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 OR51C1P-201ENST00000608504 942 ntBASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 AC026333.4-201ENST00000613543 544 ntBASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 AC127071.2-201ENST00000623293 527 ntBASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC28BQ9BUN5 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CCDC28BQ9BUN5 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.09□□□□□ -1.44
CCDC28BQ9BUN5 AC022164.1-201ENST00000568767 2673 ntBASIC6.09□□□□□ -1.44
CCDC28BQ9BUN5 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.44
CCDC28BQ9BUN5 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CCDC28BQ9BUN5 PARP4P2-201ENST00000446672 3326 ntBASIC6.09□□□□□ -1.44
CCDC28BQ9BUN5 AL442128.2-201ENST00000620246 1824 ntBASIC6.09□□□□□ -1.44
CCDC28BQ9BUN5 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
CCDC28BQ9BUN5 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 RN7SKP281-201ENST00000410472 352 ntBASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 RPL21P42-201ENST00000488408 464 ntBASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 AC091932.1-201ENST00000569381 427 ntBASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 MIR4685-201ENST00000578185 69 ntBASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 AC011193.2-201ENST00000582638 367 ntBASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 MIR7159-201ENST00000620587 66 ntBASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 RAB28P4-201ENST00000622233 665 ntBASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 RPL31P11-201ENST00000426558 1558 ntBASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms