Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 HMGN1P8-201ENST00000463578 288 ntBASIC6.14□□□□□ -1.43
VPS33AQ96AX1 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 RPL21P42-201ENST00000488408 464 ntBASIC6.14□□□□□ -1.43
VPS33AQ96AX1 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 RFPL4AP3-201ENST00000515267 345 ntBASIC6.14□□□□□ -1.43
VPS33AQ96AX1 SCARNA5-201ENST00000516201 276 ntBASIC6.14□□□□□ -1.43
VPS33AQ96AX1 AP005902.2-201ENST00000518393 307 ntBASIC6.14□□□□□ -1.43
VPS33AQ96AX1 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 OR4A40P-201ENST00000533878 948 ntBASIC6.14□□□□□ -1.43
VPS33AQ96AX1 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 AC007494.1-201ENST00000562293 760 ntBASIC6.14□□□□□ -1.43
VPS33AQ96AX1 AC091932.1-201ENST00000569381 427 ntBASIC6.14□□□□□ -1.43
VPS33AQ96AX1 MTATP6P25-201ENST00000574491 261 ntBASIC6.14□□□□□ -1.43
VPS33AQ96AX1 RN7SL208P-201ENST00000577964 296 ntBASIC6.14□□□□□ -1.43
VPS33AQ96AX1 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 DIMT1P1-201ENST00000603970 763 ntBASIC6.14□□□□□ -1.43
VPS33AQ96AX1 SNORD96A-201ENST00000606577 79 ntBASIC6.14□□□□□ -1.43
VPS33AQ96AX1 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 AC073389.3-201ENST00000609434 935 ntBASIC6.14□□□□□ -1.43
VPS33AQ96AX1 AC022726.2-201ENST00000634673 547 ntBASIC6.14□□□□□ -1.43
VPS33AQ96AX1 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 TUBBP10-201ENST00000427668 1301 ntBASIC6.14□□□□□ -1.43
VPS33AQ96AX1 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 AC095038.1-201ENST00000429248 1591 ntBASIC6.14□□□□□ -1.43
VPS33AQ96AX1 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
VPS33AQ96AX1 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 RNA5SP478-201ENST00000364657 115 ntBASIC6.13□□□□□ -1.43
VPS33AQ96AX1 MIR301B-201ENST00000390813 78 ntBASIC6.13□□□□□ -1.43
VPS33AQ96AX1 ZNF736P10Y-201ENST00000403990 1110 ntBASIC6.13□□□□□ -1.43
VPS33AQ96AX1 AL079341.1-201ENST00000404701 1207 ntBASIC6.13□□□□□ -1.43
VPS33AQ96AX1 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.13□□□□□ -1.43
VPS33AQ96AX1 RPLP1P10-201ENST00000413972 339 ntBASIC6.13□□□□□ -1.43
VPS33AQ96AX1 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 UBE2V1P14-201ENST00000415815 558 ntBASIC6.13□□□□□ -1.43
VPS33AQ96AX1 MICG-208ENST00000416822 132 ntBASIC6.13□□□□□ -1.43
VPS33AQ96AX1 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 AC021876.1-201ENST00000425959 359 ntBASIC6.13□□□□□ -1.43
VPS33AQ96AX1 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 OR13K1P-201ENST00000444577 975 ntBASIC6.13□□□□□ -1.43
VPS33AQ96AX1 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 RN7SL221P-201ENST00000466190 281 ntBASIC6.13□□□□□ -1.43
VPS33AQ96AX1 AC114728.1-201ENST00000488289 483 ntBASIC6.13□□□□□ -1.43
VPS33AQ96AX1 RPL19P11-201ENST00000495944 589 ntBASIC6.13□□□□□ -1.43
VPS33AQ96AX1 SUMO2P4-201ENST00000504193 276 ntBASIC6.13□□□□□ -1.43
VPS33AQ96AX1 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 RN7SKP242-201ENST00000515967 289 ntBASIC6.13□□□□□ -1.43
VPS33AQ96AX1 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 AL049874.4-201ENST00000557593 255 ntBASIC6.13□□□□□ -1.43
VPS33AQ96AX1 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 OR4H6P-201ENST00000563771 921 ntBASIC6.13□□□□□ -1.43
VPS33AQ96AX1 RN7SL426P-201ENST00000579106 295 ntBASIC6.13□□□□□ -1.43
VPS33AQ96AX1 AL031429.2-201ENST00000602605 649 ntBASIC6.13□□□□□ -1.43
VPS33AQ96AX1 AC093635.1-201ENST00000609028 555 ntBASIC6.13□□□□□ -1.43
VPS33AQ96AX1 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 AC027559.1-201ENST00000636288 271 ntBASIC6.13□□□□□ -1.43
VPS33AQ96AX1 AC135068.11-201ENST00000636378 921 ntBASIC6.13□□□□□ -1.43
VPS33AQ96AX1 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.13□□□□□ -1.43
VPS33AQ96AX1 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 AL591135.1-201ENST00000401578 5914 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms