Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 PHBP2-201ENST00000532859 806 ntBASIC6.77□□□□□ -1.33
CCDC38Q502W7 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 AL162233.1-201ENST00000620014 944 ntBASIC6.77□□□□□ -1.33
CCDC38Q502W7 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 AC006328.2-201ENST00000623198 397 ntBASIC6.77□□□□□ -1.33
CCDC38Q502W7 AP003108.4-201ENST00000623917 878 ntBASIC6.77□□□□□ -1.33
CCDC38Q502W7 AC012005.2-201ENST00000624333 397 ntBASIC6.77□□□□□ -1.33
CCDC38Q502W7 AC005858.3-201ENST00000624756 589 ntBASIC6.77□□□□□ -1.33
CCDC38Q502W7 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC38Q502W7 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC38Q502W7 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC38Q502W7 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC38Q502W7 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 HSPD1P8-201ENST00000400121 1658 ntBASIC6.77□□□□□ -1.33
CCDC38Q502W7 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC38Q502W7 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.77□□□□□ -1.33
CCDC38Q502W7 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC38Q502W7 DNM1P47-203ENST00000571780 12667 ntBASIC6.76□□□□□ -1.33
CCDC38Q502W7 SSXP3-201ENST00000442971 1300 ntBASIC6.76□□□□□ -1.33
CCDC38Q502W7 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC38Q502W7 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC38Q502W7 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC38Q502W7 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.76□□□□□ -1.33
CCDC38Q502W7 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
CCDC38Q502W7 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC38Q502W7 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
CCDC38Q502W7 EEF1B2P8-201ENST00000414101 671 ntBASIC6.76□□□□□ -1.33
CCDC38Q502W7 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC6.76□□□□□ -1.33
CCDC38Q502W7 AL161742.1-201ENST00000418154 584 ntBASIC6.76□□□□□ -1.33
CCDC38Q502W7 YWHAZP5-201ENST00000419975 730 ntBASIC6.76□□□□□ -1.33
CCDC38Q502W7 AC007568.1-201ENST00000422912 471 ntBASIC6.76□□□□□ -1.33
CCDC38Q502W7 PUDPP2-201ENST00000431423 643 ntBASIC6.76□□□□□ -1.33
CCDC38Q502W7 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.76□□□□□ -1.33
CCDC38Q502W7 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.76□□□□□ -1.33
CCDC38Q502W7 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC38Q502W7 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC38Q502W7 RBMY2EP-202ENST00000456360 940 ntBASIC6.76□□□□□ -1.33
CCDC38Q502W7 UOX-201ENST00000471089 899 ntBASIC6.76□□□□□ -1.33
CCDC38Q502W7 AC018639.1-201ENST00000492994 442 ntBASIC6.76□□□□□ -1.33
CCDC38Q502W7 AC073648.3-201ENST00000504939 925 ntBASIC6.76□□□□□ -1.33
CCDC38Q502W7 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC38Q502W7 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC38Q502W7 AC010442.1-201ENST00000515583 816 ntBASIC6.76□□□□□ -1.33
CCDC38Q502W7 RNU6-760P-201ENST00000516078 97 ntBASIC6.76□□□□□ -1.33
CCDC38Q502W7 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.76□□□□□ -1.33
CCDC38Q502W7 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC38Q502W7 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.76□□□□□ -1.33
CCDC38Q502W7 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.76□□□□□ -1.33
CCDC38Q502W7 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
CCDC38Q502W7 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6.76□□□□□ -1.33
CCDC38Q502W7 MIR744-201ENST00000578242 98 ntBASIC6.76□□□□□ -1.33
CCDC38Q502W7 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC38Q502W7 WBP1LP11-201ENST00000586141 328 ntBASIC6.76□□□□□ -1.33
CCDC38Q502W7 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC38Q502W7 RPS27AP19-201ENST00000597285 458 ntBASIC6.76□□□□□ -1.33
CCDC38Q502W7 AC073111.2-201ENST00000605657 1075 ntBASIC6.76□□□□□ -1.33
CCDC38Q502W7 AC025171.4-201ENST00000607250 1047 ntBASIC6.76□□□□□ -1.33
CCDC38Q502W7 AL023583.1-201ENST00000607518 1143 ntBASIC6.76□□□□□ -1.33
CCDC38Q502W7 AL445649.1-201ENST00000615941 691 ntBASIC6.76□□□□□ -1.33
CCDC38Q502W7 WBP1LP8-201ENST00000617401 327 ntBASIC6.76□□□□□ -1.33
CCDC38Q502W7 TCL6_3.1-201ENST00000619064 137 ntBASIC6.76□□□□□ -1.33
CCDC38Q502W7 MRPL57P3-201ENST00000619218 176 ntBASIC6.76□□□□□ -1.33
CCDC38Q502W7 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.76□□□□□ -1.33
CCDC38Q502W7 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.76□□□□□ -1.33
CCDC38Q502W7 OR10AB1P-202ENST00000641219 1686 ntBASIC6.76□□□□□ -1.33
CCDC38Q502W7 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
CCDC38Q502W7 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC38Q502W7 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC38Q502W7 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC38Q502W7 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC38Q502W7 AC018628.1-201ENST00000624147 3819 ntBASIC6.76□□□□□ -1.33
CCDC38Q502W7 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC38Q502W7 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
CCDC38Q502W7 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC38Q502W7 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC38Q502W7 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC38Q502W7 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC38Q502W7 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC38Q502W7 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC38Q502W7 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.75□□□□□ -1.33
CCDC38Q502W7 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC38Q502W7 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC38Q502W7 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC38Q502W7 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC38Q502W7 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms