Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
MRE11P49959 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC7.7□□□□□ -1.18
MRE11P49959 AP000432.2-201ENST00000624164 2048 ntBASIC7.7□□□□□ -1.18
MRE11P49959 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
MRE11P49959 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC7.7□□□□□ -1.18
MRE11P49959 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
MRE11P49959 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
MRE11P49959 SNORD94-201ENST00000386037 137 ntBASIC7.7□□□□□ -1.18
MRE11P49959 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
MRE11P49959 AL136100.1-201ENST00000407696 330 ntBASIC7.7□□□□□ -1.18
MRE11P49959 MIR1275-201ENST00000408770 80 ntBASIC7.7□□□□□ -1.18
MRE11P49959 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.7□□□□□ -1.18
MRE11P49959 AL355862.1-201ENST00000412705 353 ntBASIC7.7□□□□□ -1.18
MRE11P49959 NRIR-202ENST00000414795 506 ntTSL 3 BASIC7.7□□□□□ -1.18
MRE11P49959 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC7.7□□□□□ -1.18
MRE11P49959 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.7□□□□□ -1.18
MRE11P49959 AC006509.1-201ENST00000420788 634 ntBASIC7.7□□□□□ -1.18
MRE11P49959 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
MRE11P49959 AL139184.1-202ENST00000422303 222 ntBASIC7.7□□□□□ -1.18
MRE11P49959 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
MRE11P49959 LDHAP2-201ENST00000437325 985 ntBASIC7.7□□□□□ -1.18
MRE11P49959 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.7□□□□□ -1.18
MRE11P49959 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC7.7□□□□□ -1.18
MRE11P49959 MGAT2P1-201ENST00000449718 797 ntBASIC7.7□□□□□ -1.18
MRE11P49959 NPM1P19-201ENST00000450070 712 ntBASIC7.7□□□□□ -1.18
MRE11P49959 AL445991.1-201ENST00000450381 475 ntBASIC7.7□□□□□ -1.18
MRE11P49959 AC005517.1-201ENST00000452091 489 ntBASIC7.7□□□□□ -1.18
MRE11P49959 CCNJP2-201ENST00000457810 1163 ntBASIC7.7□□□□□ -1.18
MRE11P49959 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC7.7□□□□□ -1.18
MRE11P49959 RN7SL688P-201ENST00000471754 275 ntBASIC7.7□□□□□ -1.18
MRE11P49959 AC093719.1-201ENST00000480427 441 ntBASIC7.7□□□□□ -1.18
MRE11P49959 AC124945.1-201ENST00000485133 188 ntBASIC7.7□□□□□ -1.18
MRE11P49959 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
MRE11P49959 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
MRE11P49959 AC093815.1-201ENST00000508637 280 ntBASIC7.7□□□□□ -1.18
MRE11P49959 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.7□□□□□ -1.18
MRE11P49959 AP004609.2-201ENST00000532177 190 ntBASIC7.7□□□□□ -1.18
MRE11P49959 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.7□□□□□ -1.18
MRE11P49959 OR4A41P-201ENST00000533053 928 ntBASIC7.7□□□□□ -1.18
MRE11P49959 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
MRE11P49959 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC7.7□□□□□ -1.18
MRE11P49959 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC7.7□□□□□ -1.18
MRE11P49959 AP003115.1-201ENST00000569849 463 ntBASIC7.7□□□□□ -1.18
MRE11P49959 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC7.7□□□□□ -1.18
MRE11P49959 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC7.7□□□□□ -1.18
MRE11P49959 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
MRE11P49959 AL357153.4-201ENST00000620487 1016 ntBASIC7.7□□□□□ -1.18
MRE11P49959 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC7.7□□□□□ -1.18
MRE11P49959 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC7.7□□□□□ -1.18
MRE11P49959 MBD5-221ENST00000637159 902 ntTSL 5 BASIC7.7□□□□□ -1.18
MRE11P49959 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
MRE11P49959 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC7.7□□□□□ -1.18
MRE11P49959 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
MRE11P49959 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.7□□□□□ -1.18
MRE11P49959 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC7.7□□□□□ -1.18
MRE11P49959 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
MRE11P49959 AL353763.1-201ENST00000624467 1628 ntBASIC7.7□□□□□ -1.18
MRE11P49959 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
MRE11P49959 AC129502.1-201ENST00000623261 1654 ntBASIC7.7□□□□□ -1.18
MRE11P49959 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC7.69□□□□□ -1.18
MRE11P49959 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.69□□□□□ -1.18
MRE11P49959 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
MRE11P49959 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC7.69□□□□□ -1.18
MRE11P49959 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
MRE11P49959 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
MRE11P49959 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
MRE11P49959 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.69□□□□□ -1.18
MRE11P49959 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
MRE11P49959 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
MRE11P49959 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
MRE11P49959 RNU1-56P-201ENST00000391303 164 ntBASIC7.69□□□□□ -1.18
MRE11P49959 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
MRE11P49959 AL354692.1-201ENST00000423044 315 ntBASIC7.69□□□□□ -1.18
MRE11P49959 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC7.69□□□□□ -1.18
MRE11P49959 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC7.69□□□□□ -1.18
MRE11P49959 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.69□□□□□ -1.18
MRE11P49959 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC7.69□□□□□ -1.18
MRE11P49959 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.69□□□□□ -1.18
MRE11P49959 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC7.69□□□□□ -1.18
MRE11P49959 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC7.69□□□□□ -1.18
MRE11P49959 OR7E62P-201ENST00000456741 477 ntBASIC7.69□□□□□ -1.18
MRE11P49959 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC7.69□□□□□ -1.18
MRE11P49959 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
MRE11P49959 AC009567.2-201ENST00000502989 349 ntBASIC7.69□□□□□ -1.18
MRE11P49959 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.69□□□□□ -1.18
MRE11P49959 IGKV3D-34-201ENST00000522638 302 ntBASIC7.69□□□□□ -1.18
MRE11P49959 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.69□□□□□ -1.18
MRE11P49959 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC7.69□□□□□ -1.18
MRE11P49959 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
MRE11P49959 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.69□□□□□ -1.18
MRE11P49959 AC005726.4-201ENST00000582858 458 ntBASIC7.69□□□□□ -1.18
MRE11P49959 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC7.69□□□□□ -1.18
MRE11P49959 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC7.69□□□□□ -1.18
MRE11P49959 AC022400.9-201ENST00000623633 273 ntBASIC7.69□□□□□ -1.18
MRE11P49959 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.69□□□□□ -1.18
MRE11P49959 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
MRE11P49959 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.69□□□□□ -1.18
MRE11P49959 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
MRE11P49959 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.69□□□□□ -1.18
MRE11P49959 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms